Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 KRT18P2-201ENST00000447938 1258 ntBASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 AC009078.2-202ENST00000463353 338 ntBASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 RNA5SP416-201ENST00000516838 111 ntBASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 FAM86C2P-203ENST00000528684 1004 ntBASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 AC099522.2-201ENST00000607001 744 ntBASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 AC008267.7-201ENST00000624570 1194 ntBASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 AL109954.1-202ENST00000564051 2148 ntBASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 ZNF259P1-201ENST00000407656 1365 ntBASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.72□□□□□ -0.05
POLR2J2Q9GZM3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 AC097376.2-205ENST00000610159 5334 ntBASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 AC004987.2-201ENST00000395959 1148 ntBASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 RPL13AP23-201ENST00000480739 586 ntBASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 AL691432.1-201ENST00000596308 1422 ntBASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
POLR2J2Q9GZM3 AC007326.2-201ENST00000624224 7579 ntBASIC14.71□□□□□ -0.06
POLR2J2Q9GZM3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.71□□□□□ -0.06
POLR2J2Q9GZM3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
POLR2J2Q9GZM3 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.71□□□□□ -0.06
POLR2J2Q9GZM3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
POLR2J2Q9GZM3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.71□□□□□ -0.06
POLR2J2Q9GZM3 AC134407.2-201ENST00000625089 1978 ntBASIC14.71□□□□□ -0.06
POLR2J2Q9GZM3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms