Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 AC016027.1-202ENST00000607927 1699 ntBASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF4Q9BUZ4 AL390755.1-201ENST00000623716 2027 ntBASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 MIR943-201ENST00000401286 94 ntBASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 AL035633.1-201ENST00000406139 838 ntBASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 BASP1P1-201ENST00000430708 665 ntBASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 AP000842.3-202ENST00000569238 1080 ntBASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 MIR4745-201ENST00000577608 62 ntBASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 CYP2A7P1-201ENST00000595391 815 ntBASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 AC106881.1-201ENST00000605849 3329 ntBASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 AC112504.1-201ENST00000623415 1841 ntBASIC14.25□□□□□ -0.13
TRAF4Q9BUZ4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 MIR346-201ENST00000362234 95 ntBASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAF4Q9BUZ4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms