Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SMOQ99835 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMOQ99835 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SMOQ99835 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMOQ99835 AC127383.1-201ENST00000444697 1800 ntBASIC16.52■□□□□ 0.24
SMOQ99835 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMOQ99835 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMOQ99835 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.52■□□□□ 0.24
SMOQ99835 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMOQ99835 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
SMOQ99835 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMOQ99835 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
SMOQ99835 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SMOQ99835 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.52■□□□□ 0.24
SMOQ99835 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.52■□□□□ 0.24
SMOQ99835 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SMOQ99835 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.52■□□□□ 0.24
SMOQ99835 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SMOQ99835 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.52■□□□□ 0.24
SMOQ99835 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.52■□□□□ 0.24
SMOQ99835 AC092552.1-201ENST00000547243 906 ntBASIC16.52■□□□□ 0.24
SMOQ99835 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.52■□□□□ 0.24
SMOQ99835 AC012645.4-201ENST00000610691 1061 ntBASIC16.52■□□□□ 0.24
SMOQ99835 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.52■□□□□ 0.24
SMOQ99835 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMOQ99835 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.52■□□□□ 0.24
SMOQ99835 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
SMOQ99835 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.52■□□□□ 0.24
SMOQ99835 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMOQ99835 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SMOQ99835 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMOQ99835 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMOQ99835 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMOQ99835 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.52■□□□□ 0.23
SMOQ99835 AC009090.5-201ENST00000624886 2285 ntBASIC16.52■□□□□ 0.23
SMOQ99835 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SMOQ99835 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMOQ99835 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.51■□□□□ 0.23
SMOQ99835 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SMOQ99835 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SMOQ99835 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
SMOQ99835 AL133267.1-201ENST00000398220 340 ntBASIC16.51■□□□□ 0.23
SMOQ99835 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 COX5BP8-201ENST00000416911 349 ntBASIC16.51■□□□□ 0.23
SMOQ99835 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.51■□□□□ 0.23
SMOQ99835 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.51■□□□□ 0.23
SMOQ99835 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.51■□□□□ 0.23
SMOQ99835 AC104596.2-201ENST00000512793 793 ntBASIC16.51■□□□□ 0.23
SMOQ99835 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.51■□□□□ 0.23
SMOQ99835 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.51■□□□□ 0.23
SMOQ99835 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SMOQ99835 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
SMOQ99835 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.51■□□□□ 0.23
SMOQ99835 WFDC1-204ENST00000613603 549 ntBASIC16.51■□□□□ 0.23
SMOQ99835 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.51■□□□□ 0.23
SMOQ99835 AL358472.5-202ENST00000641448 1267 ntBASIC16.51■□□□□ 0.23
SMOQ99835 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SMOQ99835 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
SMOQ99835 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SMOQ99835 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.51■□□□□ 0.23
SMOQ99835 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMOQ99835 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.51■□□□□ 0.23
SMOQ99835 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.5■□□□□ 0.23
SMOQ99835 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 325.1 ms