Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.77■□□□□ 0.28
RAD9AQ99638 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAD9AQ99638 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.77■□□□□ 0.28
RAD9AQ99638 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.77■□□□□ 0.28
RAD9AQ99638 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.77■□□□□ 0.28
RAD9AQ99638 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.77■□□□□ 0.28
RAD9AQ99638 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.77■□□□□ 0.28
RAD9AQ99638 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RAD9AQ99638 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAD9AQ99638 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.77■□□□□ 0.28
RAD9AQ99638 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.77■□□□□ 0.28
RAD9AQ99638 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.77■□□□□ 0.28
RAD9AQ99638 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAD9AQ99638 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.77■□□□□ 0.28
RAD9AQ99638 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAD9AQ99638 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.77■□□□□ 0.27
RAD9AQ99638 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAD9AQ99638 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAD9AQ99638 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAD9AQ99638 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
RAD9AQ99638 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAD9AQ99638 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAD9AQ99638 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.76■□□□□ 0.27
RAD9AQ99638 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.76■□□□□ 0.27
RAD9AQ99638 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RAD9AQ99638 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.76■□□□□ 0.27
RAD9AQ99638 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.76■□□□□ 0.27
RAD9AQ99638 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.76■□□□□ 0.27
RAD9AQ99638 POM121L10P-201ENST00000436994 1285 ntBASIC16.76■□□□□ 0.27
RAD9AQ99638 EIF4HP1-201ENST00000453115 687 ntBASIC16.76■□□□□ 0.27
RAD9AQ99638 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.76■□□□□ 0.27
RAD9AQ99638 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.76■□□□□ 0.27
RAD9AQ99638 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.76■□□□□ 0.27
RAD9AQ99638 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RAD9AQ99638 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RAD9AQ99638 MIR3619-201ENST00000579667 83 ntBASIC16.76■□□□□ 0.27
RAD9AQ99638 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.76■□□□□ 0.27
RAD9AQ99638 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RAD9AQ99638 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RAD9AQ99638 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.76■□□□□ 0.27
RAD9AQ99638 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.76■□□□□ 0.27
RAD9AQ99638 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
RAD9AQ99638 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.76■□□□□ 0.27
RAD9AQ99638 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAD9AQ99638 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.75■□□□□ 0.27
RAD9AQ99638 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
RAD9AQ99638 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RAD9AQ99638 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.75■□□□□ 0.27
RAD9AQ99638 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.75■□□□□ 0.27
RAD9AQ99638 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
RAD9AQ99638 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.75■□□□□ 0.27
RAD9AQ99638 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.75■□□□□ 0.27
RAD9AQ99638 RN7SL769P-201ENST00000469386 295 ntBASIC16.75■□□□□ 0.27
RAD9AQ99638 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.75■□□□□ 0.27
RAD9AQ99638 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.75■□□□□ 0.27
RAD9AQ99638 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.75■□□□□ 0.27
RAD9AQ99638 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RAD9AQ99638 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAD9AQ99638 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.74■□□□□ 0.27
RAD9AQ99638 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAD9AQ99638 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.74■□□□□ 0.27
RAD9AQ99638 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAD9AQ99638 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RAD9AQ99638 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.74■□□□□ 0.27
RAD9AQ99638 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAD9AQ99638 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms