Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDCA3Q99618 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
CDCA3Q99618 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDCA3Q99618 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDCA3Q99618 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CDCA3Q99618 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CDCA3Q99618 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDCA3Q99618 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.26■□□□□ 0.19
CDCA3Q99618 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.26■□□□□ 0.19
CDCA3Q99618 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDCA3Q99618 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 AL133373.2-201ENST00000623187 2828 ntBASIC16.26■□□□□ 0.19
CDCA3Q99618 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 AC007613.1-201ENST00000572811 2597 ntBASIC16.26■□□□□ 0.19
CDCA3Q99618 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CDCA3Q99618 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.26■□□□□ 0.19
CDCA3Q99618 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.26■□□□□ 0.19
CDCA3Q99618 FAM8A4P-201ENST00000435433 1213 ntBASIC16.26■□□□□ 0.19
CDCA3Q99618 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.26■□□□□ 0.19
CDCA3Q99618 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 MPRIPP1-201ENST00000452433 1089 ntBASIC16.26■□□□□ 0.19
CDCA3Q99618 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 COX5BP1-201ENST00000507622 393 ntBASIC16.26■□□□□ 0.19
CDCA3Q99618 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.26■□□□□ 0.19
CDCA3Q99618 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.26■□□□□ 0.19
CDCA3Q99618 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.26■□□□□ 0.19
CDCA3Q99618 CHMP4BP1-201ENST00000556017 588 ntBASIC16.26■□□□□ 0.19
CDCA3Q99618 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CDCA3Q99618 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.26■□□□□ 0.19
CDCA3Q99618 MIR6727-201ENST00000620702 65 ntBASIC16.26■□□□□ 0.19
CDCA3Q99618 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.26■□□□□ 0.19
CDCA3Q99618 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDCA3Q99618 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.26■□□□□ 0.19
CDCA3Q99618 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.26■□□□□ 0.19
CDCA3Q99618 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
CDCA3Q99618 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDCA3Q99618 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.26■□□□□ 0.19
CDCA3Q99618 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDCA3Q99618 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDCA3Q99618 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.26■□□□□ 0.19
CDCA3Q99618 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDCA3Q99618 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDCA3Q99618 AC018892.3-201ENST00000623986 2499 ntBASIC16.25■□□□□ 0.19
CDCA3Q99618 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CDCA3Q99618 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.25■□□□□ 0.19
CDCA3Q99618 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.25■□□□□ 0.19
CDCA3Q99618 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.25■□□□□ 0.19
CDCA3Q99618 AC016700.1-201ENST00000429424 312 ntBASIC16.25■□□□□ 0.19
CDCA3Q99618 AL133466.1-201ENST00000447582 150 ntBASIC16.25■□□□□ 0.19
CDCA3Q99618 SERPINA13P-202ENST00000478994 924 ntBASIC16.25■□□□□ 0.19
CDCA3Q99618 TMEM198B-204ENST00000484016 896 ntBASIC16.25■□□□□ 0.19
CDCA3Q99618 AC245884.6-201ENST00000515672 1067 ntBASIC16.25■□□□□ 0.19
CDCA3Q99618 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.25■□□□□ 0.19
CDCA3Q99618 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.25■□□□□ 0.19
CDCA3Q99618 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.25■□□□□ 0.19
CDCA3Q99618 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.25■□□□□ 0.19
CDCA3Q99618 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDCA3Q99618 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.25■□□□□ 0.19
CDCA3Q99618 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDCA3Q99618 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
CDCA3Q99618 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCA3Q99618 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCA3Q99618 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDCA3Q99618 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDCA3Q99618 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDCA3Q99618 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDCA3Q99618 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CDCA3Q99618 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.24■□□□□ 0.19
CDCA3Q99618 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.24■□□□□ 0.19
CDCA3Q99618 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDCA3Q99618 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms