Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NDNQ99608 PPT1-215ENST00000641471 2368 ntBASIC15.98■□□□□ 0.15
NDNQ99608 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.98■□□□□ 0.15
NDNQ99608 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDNQ99608 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.97■□□□□ 0.15
NDNQ99608 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NDNQ99608 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDNQ99608 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.97■□□□□ 0.15
NDNQ99608 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
NDNQ99608 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDNQ99608 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.97■□□□□ 0.15
NDNQ99608 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.97■□□□□ 0.15
NDNQ99608 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDNQ99608 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDNQ99608 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
NDNQ99608 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDNQ99608 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDNQ99608 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.97■□□□□ 0.15
NDNQ99608 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.97■□□□□ 0.15
NDNQ99608 AP000842.3-202ENST00000569238 1080 ntBASIC15.97■□□□□ 0.15
NDNQ99608 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.97■□□□□ 0.15
NDNQ99608 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.97■□□□□ 0.15
NDNQ99608 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.97■□□□□ 0.15
NDNQ99608 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.97■□□□□ 0.15
NDNQ99608 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.97■□□□□ 0.15
NDNQ99608 AC026748.1-201ENST00000624349 3251 ntBASIC15.97■□□□□ 0.15
NDNQ99608 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDNQ99608 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDNQ99608 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.97■□□□□ 0.15
NDNQ99608 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDNQ99608 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDNQ99608 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NDNQ99608 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDNQ99608 AC022532.1-201ENST00000624563 1728 ntBASIC15.97■□□□□ 0.15
NDNQ99608 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NDNQ99608 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.96■□□□□ 0.15
NDNQ99608 AC023908.3-201ENST00000564211 3047 ntBASIC15.96■□□□□ 0.15
NDNQ99608 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.96■□□□□ 0.15
NDNQ99608 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NDNQ99608 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
NDNQ99608 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.96■□□□□ 0.15
NDNQ99608 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.96■□□□□ 0.15
NDNQ99608 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 AC092127.1-201ENST00000567093 3455 ntBASIC15.96■□□□□ 0.15
NDNQ99608 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 HTR5BP-201ENST00000430851 1154 ntBASIC15.96■□□□□ 0.15
NDNQ99608 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.96■□□□□ 0.15
NDNQ99608 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 IGHV3-62-201ENST00000520057 340 ntBASIC15.96■□□□□ 0.15
NDNQ99608 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.96■□□□□ 0.15
NDNQ99608 LINC01225-203ENST00000563550 1244 ntBASIC15.96■□□□□ 0.15
NDNQ99608 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.96■□□□□ 0.15
NDNQ99608 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.96■□□□□ 0.15
NDNQ99608 AC024267.1-201ENST00000582320 895 ntBASIC15.96■□□□□ 0.15
NDNQ99608 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NDNQ99608 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.96■□□□□ 0.15
NDNQ99608 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
NDNQ99608 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDNQ99608 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NDNQ99608 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.96■□□□□ 0.15
NDNQ99608 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NDNQ99608 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
NDNQ99608 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.96■□□□□ 0.14
NDNQ99608 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.96■□□□□ 0.14
NDNQ99608 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
NDNQ99608 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NDNQ99608 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NDNQ99608 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.14
NDNQ99608 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.95■□□□□ 0.14
NDNQ99608 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDNQ99608 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDNQ99608 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NDNQ99608 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDNQ99608 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NDNQ99608 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDNQ99608 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDNQ99608 UXT-AS1-201ENST00000590504 1525 ntBASIC15.95■□□□□ 0.14
NDNQ99608 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NDNQ99608 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
NDNQ99608 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NDNQ99608 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
NDNQ99608 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDNQ99608 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
NDNQ99608 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms