Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 SART3-203ENST00000546611 1184 ntBASIC12.92□□□□□ -0.34
RAB40CQ96S21 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 AC012313.10-201ENST00000623509 926 ntBASIC12.92□□□□□ -0.34
RAB40CQ96S21 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB40CQ96S21 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
RAB40CQ96S21 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 AL359258.3-201ENST00000622910 2331 ntBASIC12.91□□□□□ -0.34
RAB40CQ96S21 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 LINC00552-201ENST00000625151 2579 ntBASIC12.91□□□□□ -0.34
RAB40CQ96S21 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 AC134407.2-201ENST00000625089 1978 ntBASIC12.91□□□□□ -0.34
RAB40CQ96S21 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.91□□□□□ -0.34
RAB40CQ96S21 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 AC008667.4-201ENST00000607370 168 ntBASIC12.91□□□□□ -0.34
RAB40CQ96S21 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RAB40CQ96S21 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB40CQ96S21 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 AC148477.4-201ENST00000613430 1793 ntBASIC12.9□□□□□ -0.34
RAB40CQ96S21 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB40CQ96S21 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB40CQ96S21 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms