Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH3Q96II8 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.06■□□□□ 0.32
LRCH3Q96II8 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRCH3Q96II8 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH3Q96II8 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.06■□□□□ 0.32
LRCH3Q96II8 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.06■□□□□ 0.32
LRCH3Q96II8 AL590640.2-201ENST00000457038 527 ntBASIC17.06■□□□□ 0.32
LRCH3Q96II8 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH3Q96II8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.06■□□□□ 0.32
LRCH3Q96II8 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH3Q96II8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.06■□□□□ 0.32
LRCH3Q96II8 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.06■□□□□ 0.32
LRCH3Q96II8 AC145423.3-201ENST00000615987 467 ntBASIC17.06■□□□□ 0.32
LRCH3Q96II8 AC091544.8-201ENST00000619490 361 ntBASIC17.06■□□□□ 0.32
LRCH3Q96II8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.06■□□□□ 0.32
LRCH3Q96II8 AL139011.1-202ENST00000642063 584 ntBASIC17.06■□□□□ 0.32
LRCH3Q96II8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH3Q96II8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH3Q96II8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.06■□□□□ 0.32
LRCH3Q96II8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH3Q96II8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRCH3Q96II8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRCH3Q96II8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRCH3Q96II8 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 TUBBP5-203ENST00000508529 1334 ntBASIC17.05■□□□□ 0.32
LRCH3Q96II8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 AC098935.1-201ENST00000446057 611 ntBASIC17.05■□□□□ 0.32
LRCH3Q96II8 HSPB1P2-201ENST00000448722 546 ntBASIC17.05■□□□□ 0.32
LRCH3Q96II8 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 COX6A1P2-201ENST00000620597 330 ntBASIC17.05■□□□□ 0.32
LRCH3Q96II8 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH3Q96II8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 AC106886.4-201ENST00000623557 2502 ntBASIC17.05■□□□□ 0.32
LRCH3Q96II8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.05■□□□□ 0.32
LRCH3Q96II8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 RN7SL8P-201ENST00000461771 266 ntBASIC17.04■□□□□ 0.32
LRCH3Q96II8 AC024681.1-201ENST00000521917 487 ntBASIC17.04■□□□□ 0.32
LRCH3Q96II8 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRCH3Q96II8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRCH3Q96II8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms