Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDCA5Q96FF9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDCA5Q96FF9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.27■□□□□ 0.51
CDCA5Q96FF9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDCA5Q96FF9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 AC022217.1-201ENST00000521069 738 ntBASIC18.26■□□□□ 0.51
CDCA5Q96FF9 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 AL353726.2-201ENST00000623259 884 ntBASIC18.26■□□□□ 0.51
CDCA5Q96FF9 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 AC008132.1-202ENST00000342005 1389 ntBASIC18.26■□□□□ 0.51
CDCA5Q96FF9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.26■□□□□ 0.51
CDCA5Q96FF9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 LRRC59-203ENST00000576448 1531 ntBASIC18.25■□□□□ 0.51
CDCA5Q96FF9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 AL008707.1-201ENST00000422498 534 ntBASIC18.25■□□□□ 0.51
CDCA5Q96FF9 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 AL645939.5-201ENST00000606834 243 ntBASIC18.25■□□□□ 0.51
CDCA5Q96FF9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDCA5Q96FF9 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.24■□□□□ 0.51
CDCA5Q96FF9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.24■□□□□ 0.51
CDCA5Q96FF9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDCA5Q96FF9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA5Q96FF9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CDCA5Q96FF9 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA5Q96FF9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.24■□□□□ 0.51
CDCA5Q96FF9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA5Q96FF9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.24■□□□□ 0.51
CDCA5Q96FF9 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDCA5Q96FF9 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms