Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 MRPS18AP1-201ENST00000414458 589 ntBASIC14.06□□□□□ -0.16
APH1AQ96BI3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 AC008738.7-201ENST00000609744 511 ntBASIC14.06□□□□□ -0.16
APH1AQ96BI3 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.06□□□□□ -0.16
APH1AQ96BI3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.06□□□□□ -0.16
APH1AQ96BI3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 AC112504.1-201ENST00000623415 1841 ntBASIC14.06□□□□□ -0.16
APH1AQ96BI3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.06□□□□□ -0.16
APH1AQ96BI3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APH1AQ96BI3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.05□□□□□ -0.16
APH1AQ96BI3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 FAM207CP-201ENST00000443486 507 ntBASIC14.05□□□□□ -0.16
APH1AQ96BI3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.05□□□□□ -0.16
APH1AQ96BI3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APH1AQ96BI3 AC010491.1-201ENST00000563101 2797 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms