Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 AC236430.1-201ENST00000402231 743 ntBASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 TSSK5P-201ENST00000423978 907 ntBASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 COX20P2-201ENST00000452636 358 ntBASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 AL139010.1-201ENST00000454878 894 ntBASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 SERBP1P3-201ENST00000459980 809 ntBASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 RN7SL204P-201ENST00000582831 262 ntBASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 LINC02560-201ENST00000596379 459 ntBASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 AL133215.2-201ENST00000609242 977 ntBASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 TEX28P1-201ENST00000613479 1221 ntBASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 TEX28P2-201ENST00000617764 1221 ntBASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 AC008761.3-201ENST00000624803 892 ntBASIC15.77■□□□□ 0.12
SH3KBP1Q96B97 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.77■□□□□ 0.11
SH3KBP1Q96B97 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SH3KBP1Q96B97 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SH3KBP1Q96B97 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SH3KBP1Q96B97 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SH3KBP1Q96B97 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.77■□□□□ 0.11
SH3KBP1Q96B97 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 RPL37AP1-201ENST00000412502 279 ntBASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 BANF1P1-201ENST00000553684 263 ntBASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SH3KBP1Q96B97 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SH3KBP1Q96B97 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SH3KBP1Q96B97 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.75■□□□□ 0.11
SH3KBP1Q96B97 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SH3KBP1Q96B97 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SH3KBP1Q96B97 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SH3KBP1Q96B97 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SH3KBP1Q96B97 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms