Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL031284.1-201ENST00000419297 478 ntBASIC15.31■□□□□ 0.04
VPS33AQ96AX1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 AL773604.1-201ENST00000617417 272 ntBASIC15.31■□□□□ 0.04
VPS33AQ96AX1 AC116407.3-201ENST00000623905 1129 ntBASIC15.31■□□□□ 0.04
VPS33AQ96AX1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 PMS2P7-201ENST00000506558 1336 ntBASIC15.31■□□□□ 0.04
VPS33AQ96AX1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.31■□□□□ 0.04
VPS33AQ96AX1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS33AQ96AX1 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 AC140658.5-201ENST00000438532 169 ntBASIC15.3■□□□□ 0.04
VPS33AQ96AX1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 PRYP6-201ENST00000514804 343 ntBASIC15.3■□□□□ 0.04
VPS33AQ96AX1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 RN7SL510P-201ENST00000581311 263 ntBASIC15.3■□□□□ 0.04
VPS33AQ96AX1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 AL009178.2-201ENST00000597278 2719 ntBASIC15.3■□□□□ 0.04
VPS33AQ96AX1 AC023141.13-201ENST00000604991 943 ntBASIC15.3■□□□□ 0.04
VPS33AQ96AX1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VPS33AQ96AX1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.29■□□□□ 0.04
VPS33AQ96AX1 RNA5SP419-201ENST00000515908 135 ntBASIC15.29■□□□□ 0.04
VPS33AQ96AX1 RNA5SP415-201ENST00000517246 115 ntBASIC15.29■□□□□ 0.04
VPS33AQ96AX1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms