Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 AC022532.1-201ENST00000624563 1728 ntBASIC13.93□□□□□ -0.18
SPTSSAQ969W0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SPTSSAQ969W0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 HYMAI-201ENST00000635591 3347 ntBASIC13.92□□□□□ -0.18
SPTSSAQ969W0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 AC004461.1-201ENST00000412461 403 ntBASIC13.92□□□□□ -0.18
SPTSSAQ969W0 AL627223.1-201ENST00000416693 442 ntBASIC13.92□□□□□ -0.18
SPTSSAQ969W0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 AP000347.1-202ENST00000435868 847 ntBASIC13.92□□□□□ -0.18
SPTSSAQ969W0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 AC018529.1-201ENST00000613063 361 ntBASIC13.92□□□□□ -0.18
SPTSSAQ969W0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 AC087481.3-201ENST00000602886 1894 ntBASIC13.92□□□□□ -0.18
SPTSSAQ969W0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 AL139384.1-201ENST00000612143 3047 ntBASIC13.92□□□□□ -0.18
SPTSSAQ969W0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SPTSSAQ969W0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.92□□□□□ -0.18
SPTSSAQ969W0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 TMBIM7P-203ENST00000641617 1718 ntBASIC13.91□□□□□ -0.18
SPTSSAQ969W0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 AC211486.1-202ENST00000416371 468 ntBASIC13.91□□□□□ -0.18
SPTSSAQ969W0 UPF3AP3-201ENST00000420996 769 ntBASIC13.91□□□□□ -0.18
SPTSSAQ969W0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 PHKG1P2-201ENST00000457537 863 ntBASIC13.91□□□□□ -0.18
SPTSSAQ969W0 AC112482.1-201ENST00000492080 688 ntBASIC13.91□□□□□ -0.18
SPTSSAQ969W0 AC211476.1-201ENST00000503899 468 ntBASIC13.91□□□□□ -0.18
SPTSSAQ969W0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.91□□□□□ -0.18
SPTSSAQ969W0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms