Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 AC024267.1-201ENST00000582320 895 ntBASIC14.29□□□□□ -0.12
PTP4A1Q93096 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 AC127383.1-201ENST00000444697 1800 ntBASIC14.29□□□□□ -0.12
PTP4A1Q93096 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTP4A1Q93096 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
PTP4A1Q93096 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 AC106881.1-201ENST00000605849 3329 ntBASIC14.28□□□□□ -0.12
PTP4A1Q93096 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 SNX18-202ENST00000343017 3140 ntBASIC14.28□□□□□ -0.12
PTP4A1Q93096 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 AP000347.1-202ENST00000435868 847 ntBASIC14.28□□□□□ -0.12
PTP4A1Q93096 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 MTDHP5-201ENST00000598980 586 ntBASIC14.28□□□□□ -0.12
PTP4A1Q93096 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 AC099522.2-201ENST00000607001 744 ntBASIC14.28□□□□□ -0.12
PTP4A1Q93096 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PTP4A1Q93096 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PTP4A1Q93096 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PTP4A1Q93096 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.27□□□□□ -0.12
PTP4A1Q93096 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.27□□□□□ -0.12
PTP4A1Q93096 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PTP4A1Q93096 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PTP4A1Q93096 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PTP4A1Q93096 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms