Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 AC092135.3-201ENST00000624151 1846 ntBASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 BX005266.1-201ENST00000473402 457 ntBASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 MIR4321-201ENST00000592276 80 ntBASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 NSUN5P1-202ENST00000421140 1535 ntBASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 NSUN5P2-203ENST00000457352 1529 ntBASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MBD3L1Q8WWY6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 MIR935-201ENST00000401179 91 ntBASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 CHCHD2P8-201ENST00000429873 447 ntBASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.46□□□□□ -0.41
MBD3L1Q8WWY6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms