Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
U2AF1L4Q8WU68 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.11■□□□□ 0.49
U2AF1L4Q8WU68 ALOX12P2-203ENST00000570921 1945 ntBASIC18.11■□□□□ 0.49
U2AF1L4Q8WU68 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.11■□□□□ 0.49
U2AF1L4Q8WU68 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
U2AF1L4Q8WU68 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.11■□□□□ 0.49
U2AF1L4Q8WU68 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.11■□□□□ 0.49
U2AF1L4Q8WU68 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
U2AF1L4Q8WU68 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
U2AF1L4Q8WU68 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
U2AF1L4Q8WU68 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
U2AF1L4Q8WU68 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 IGHJ2P-201ENST00000454480 60 ntBASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 AC068587.3-201ENST00000526613 355 ntBASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 PTP4A1P2-201ENST00000546033 454 ntBASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 RN7SL560P-201ENST00000577943 264 ntBASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 MIR6727-201ENST00000620702 65 ntBASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
U2AF1L4Q8WU68 AC008741.2-201ENST00000612792 3115 ntBASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 FO393414.2-201ENST00000405153 598 ntBASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 AL118558.3-201ENST00000607414 1079 ntBASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 AL021578.1-201ENST00000613646 709 ntBASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
U2AF1L4Q8WU68 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
U2AF1L4Q8WU68 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.08■□□□□ 0.49
U2AF1L4Q8WU68 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.08■□□□□ 0.49
U2AF1L4Q8WU68 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
U2AF1L4Q8WU68 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.08■□□□□ 0.49
U2AF1L4Q8WU68 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
U2AF1L4Q8WU68 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
U2AF1L4Q8WU68 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.08■□□□□ 0.49
U2AF1L4Q8WU68 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
U2AF1L4Q8WU68 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
U2AF1L4Q8WU68 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
U2AF1L4Q8WU68 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
U2AF1L4Q8WU68 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
U2AF1L4Q8WU68 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
U2AF1L4Q8WU68 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
U2AF1L4Q8WU68 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.08■□□□□ 0.48
U2AF1L4Q8WU68 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
U2AF1L4Q8WU68 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms