Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 HCG4-201ENST00000418983 998 ntBASIC15.5■□□□□ 0.07
HIPK4Q8NE63 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.5■□□□□ 0.07
HIPK4Q8NE63 UPK3BP1-201ENST00000428678 509 ntBASIC15.5■□□□□ 0.07
HIPK4Q8NE63 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 HCG4P8-203ENST00000443049 980 ntBASIC15.5■□□□□ 0.07
HIPK4Q8NE63 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 AC021087.4-201ENST00000563761 564 ntBASIC15.5■□□□□ 0.07
HIPK4Q8NE63 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 AC090616.6-203ENST00000579186 1945 ntBASIC15.5■□□□□ 0.07
HIPK4Q8NE63 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIPK4Q8NE63 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 AC129492.6-201ENST00000611383 1305 ntBASIC15.49■□□□□ 0.07
HIPK4Q8NE63 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 AC232323.1-201ENST00000540724 2099 ntBASIC15.49■□□□□ 0.07
HIPK4Q8NE63 REXO1L5P-201ENST00000622260 2098 ntBASIC15.49■□□□□ 0.07
HIPK4Q8NE63 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 AC107918.4-202ENST00000641623 219 ntBASIC15.49■□□□□ 0.07
HIPK4Q8NE63 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 AC008677.1-201ENST00000519230 1561 ntBASIC15.49■□□□□ 0.07
HIPK4Q8NE63 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIPK4Q8NE63 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 AC126335.2-201ENST00000623362 4637 ntBASIC15.48■□□□□ 0.07
HIPK4Q8NE63 AC015656.1-201ENST00000624209 3578 ntBASIC15.48■□□□□ 0.07
HIPK4Q8NE63 C18orf15-201ENST00000623680 2534 ntBASIC15.48■□□□□ 0.07
HIPK4Q8NE63 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.48■□□□□ 0.07
HIPK4Q8NE63 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms