Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC00311Q8N616 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00311Q8N616 AC136621.1-201ENST00000624017 2304 ntBASIC12.82□□□□□ -0.36
LINC00311Q8N616 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 TOMM22P5-201ENST00000416399 439 ntBASIC12.81□□□□□ -0.36
LINC00311Q8N616 AC015922.1-201ENST00000421102 1152 ntBASIC12.81□□□□□ -0.36
LINC00311Q8N616 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 RPL13P2-201ENST00000440687 659 ntBASIC12.81□□□□□ -0.36
LINC00311Q8N616 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 AL590560.3-201ENST00000623350 461 ntBASIC12.81□□□□□ -0.36
LINC00311Q8N616 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 PPT1-215ENST00000641471 2368 ntBASIC12.81□□□□□ -0.36
LINC00311Q8N616 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00311Q8N616 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
LINC00311Q8N616 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 AC100757.3-201ENST00000622361 1406 ntBASIC12.8□□□□□ -0.36
LINC00311Q8N616 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 AL133267.1-201ENST00000398220 340 ntBASIC12.8□□□□□ -0.36
LINC00311Q8N616 MIR943-201ENST00000401286 94 ntBASIC12.8□□□□□ -0.36
LINC00311Q8N616 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.8□□□□□ -0.36
LINC00311Q8N616 TREML5P-201ENST00000421694 576 ntBASIC12.8□□□□□ -0.36
LINC00311Q8N616 AC241585.1-201ENST00000433527 519 ntBASIC12.8□□□□□ -0.36
LINC00311Q8N616 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00311Q8N616 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 AL844908.2-201ENST00000609461 460 ntBASIC12.8□□□□□ -0.36
LINC00311Q8N616 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00311Q8N616 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms