Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 RN7SL560P-201ENST00000577943 264 ntBASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 AC091271.1-201ENST00000611877 1162 ntBASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 RHOXF1P1-202ENST00000635473 501 ntBASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 AC092364.2-201ENST00000596710 2692 ntBASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 AC134407.2-201ENST00000625089 1978 ntBASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 MIR1247-201ENST00000408206 136 ntBASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 GOLGA2P4-201ENST00000441462 777 ntBASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.67■□□□□ 0.1
TMEFF1Q8IYR6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 GPAA1P2-201ENST00000417923 928 ntBASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 KRT90P-201ENST00000549264 1064 ntBASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEFF1Q8IYR6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms