Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PACS2Q86VP3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PACS2Q86VP3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.08■□□□□ 0.17
PACS2Q86VP3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PACS2Q86VP3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PACS2Q86VP3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PACS2Q86VP3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.08■□□□□ 0.17
PACS2Q86VP3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
PACS2Q86VP3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.08■□□□□ 0.17
PACS2Q86VP3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PACS2Q86VP3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PACS2Q86VP3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.08■□□□□ 0.17
PACS2Q86VP3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PACS2Q86VP3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.08■□□□□ 0.17
PACS2Q86VP3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PACS2Q86VP3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PACS2Q86VP3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
PACS2Q86VP3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.08■□□□□ 0.16
PACS2Q86VP3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
PACS2Q86VP3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 AP000867.4-201ENST00000641616 219 ntBASIC16.08■□□□□ 0.16
PACS2Q86VP3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
PACS2Q86VP3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PACS2Q86VP3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 MROH4P-201ENST00000431302 1578 ntBASIC16.08■□□□□ 0.16
PACS2Q86VP3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 AC040160.2-201ENST00000623816 1675 ntBASIC16.08■□□□□ 0.16
PACS2Q86VP3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.08■□□□□ 0.16
PACS2Q86VP3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
PACS2Q86VP3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.08■□□□□ 0.16
PACS2Q86VP3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 FAM197Y8-203ENST00000450145 560 ntBASIC16.07■□□□□ 0.16
PACS2Q86VP3 AF186996.4-201ENST00000467186 377 ntBASIC16.07■□□□□ 0.16
PACS2Q86VP3 AL662844.1-201ENST00000546340 181 ntBASIC16.07■□□□□ 0.16
PACS2Q86VP3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 AL391001.1-201ENST00000602747 715 ntBASIC16.07■□□□□ 0.16
PACS2Q86VP3 AC104692.2-201ENST00000603054 253 ntBASIC16.07■□□□□ 0.16
PACS2Q86VP3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 AD001527.2-201ENST00000622994 785 ntBASIC16.07■□□□□ 0.16
PACS2Q86VP3 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 KRT8P10-201ENST00000450021 1447 ntBASIC16.07■□□□□ 0.16
PACS2Q86VP3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 AC092919.2-201ENST00000623631 1645 ntBASIC16.07■□□□□ 0.16
PACS2Q86VP3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC16.07■□□□□ 0.16
PACS2Q86VP3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PACS2Q86VP3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms