Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 RN7SL713P-201ENST00000582127 302 ntBASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 PPY2P-201ENST00000582808 702 ntBASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 RPS15-205ENST00000586686 562 ntTSL 5 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 RPS15-208ENST00000591804 711 ntTSL 5 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 TPM3P8-201ENST00000330554 643 ntBASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 PTPA-218ENST00000435132 618 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 AC004066.1-201ENST00000502488 802 ntBASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 AC092364.2-201ENST00000596710 2692 ntBASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 ADM-202ENST00000524948 584 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 RNF41-210ENST00000552244 716 ntTSL 3 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 AL451050.2-201ENST00000606967 682 ntBASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC23.17■■□□□ 1.3
CCDC141Q6ZP82 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 AC104457.1-201ENST00000401024 814 ntBASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 RGS5-214ENST00000429865 754 ntTSL 3 BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 FAM8A4P-201ENST00000435433 1213 ntBASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC141Q6ZP82 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC141Q6ZP82 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC141Q6ZP82 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC141Q6ZP82 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CCDC141Q6ZP82 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC23.15■■□□□ 1.3
CCDC141Q6ZP82 HLA-DPB2-205ENST00000435074 1188 ntBASIC23.15■■□□□ 1.3
CCDC141Q6ZP82 SAMD11P1-201ENST00000571429 661 ntBASIC23.15■■□□□ 1.3
CCDC141Q6ZP82 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC23.15■■□□□ 1.3
CCDC141Q6ZP82 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CCDC141Q6ZP82 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC141Q6ZP82 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC141Q6ZP82 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC141Q6ZP82 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.15■■□□□ 1.3
CCDC141Q6ZP82 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC141Q6ZP82 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC141Q6ZP82 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC141Q6ZP82 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
CCDC141Q6ZP82 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC23.14■■□□□ 1.3
CCDC141Q6ZP82 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC141Q6ZP82 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.3
CCDC141Q6ZP82 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC141Q6ZP82 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC141Q6ZP82 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC141Q6ZP82 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC23.14■■□□□ 1.29
CCDC141Q6ZP82 DEF8-202ENST00000418391 852 ntTSL 2 BASIC23.14■■□□□ 1.29
CCDC141Q6ZP82 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC23.14■■□□□ 1.29
CCDC141Q6ZP82 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC23.14■■□□□ 1.29
CCDC141Q6ZP82 HIST2H2BB-201ENST00000449108 381 ntBASIC23.14■■□□□ 1.29
CCDC141Q6ZP82 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
CCDC141Q6ZP82 AL391280.1-201ENST00000506969 1062 ntBASIC23.14■■□□□ 1.29
CCDC141Q6ZP82 COX5BP1-201ENST00000507622 393 ntBASIC23.14■■□□□ 1.29
CCDC141Q6ZP82 PARP8-218ENST00000513738 596 ntTSL 4 BASIC23.14■■□□□ 1.29
CCDC141Q6ZP82 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms