Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC006435.4-201ENST00000625037 234 ntBASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 AL356737.1-201ENST00000634391 234 ntBASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.84■□□□□ 0.29
CNKSR3Q6P9H4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CNKSR3Q6P9H4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.83■□□□□ 0.29
CNKSR3Q6P9H4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CNKSR3Q6P9H4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CNKSR3Q6P9H4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNKSR3Q6P9H4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 AC018735.1-201ENST00000437208 1502 ntBASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 HSPB1P2-201ENST00000448722 546 ntBASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 UPF3AP2-201ENST00000457924 1132 ntBASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 AC126915.1-201ENST00000522847 1038 ntBASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.82■□□□□ 0.28
CNKSR3Q6P9H4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms