Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 CFL1-206ENST00000527344 962 ntTSL 2 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC10.39□□□□□ -0.75
VPS13DQ5THJ4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 AL136309.1-201ENST00000403917 691 ntBASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 RPL13AP19-201ENST00000434320 584 ntBASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 AP001002.3-201ENST00000623482 206 ntBASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 PCDH8P1-201ENST00000428983 2773 ntBASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 EIF3FP3-201ENST00000434851 1086 ntBASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 CU633904.3-201ENST00000624042 1029 ntBASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 AC068587.8-201ENST00000641239 219 ntBASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 AC010141.1-201ENST00000411585 623 ntBASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 PFN2-202ENST00000423691 911 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 FAM8A4P-201ENST00000435433 1213 ntBASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 AC025181.2-201ENST00000606994 802 ntBASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS13DQ5THJ4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 U62317.3-201ENST00000608319 855 ntBASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 WT1-AS_6.1-201ENST00000614919 121 ntBASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 PDIA3P2-201ENST00000428073 158 ntBASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 AC004899.1-201ENST00000424687 1714 ntBASIC10.37□□□□□ -0.75
VPS13DQ5THJ4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms