Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 FAM185BP-201ENST00000443595 716 ntBASIC14.27□□□□□ -0.13
CCDC58Q4VC31 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 AP002469.2-201ENST00000531724 424 ntBASIC14.27□□□□□ -0.13
CCDC58Q4VC31 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 MIR1199-201ENST00000621445 119 ntBASIC14.27□□□□□ -0.13
CCDC58Q4VC31 AL645728.2-201ENST00000641974 660 ntBASIC14.27□□□□□ -0.13
CCDC58Q4VC31 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 DGCR9-201ENST00000609630 2415 ntBASIC14.26□□□□□ -0.13
CCDC58Q4VC31 AC005912.2-201ENST00000619492 2400 ntBASIC14.26□□□□□ -0.13
CCDC58Q4VC31 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 CICP8-201ENST00000455800 2813 ntBASIC14.26□□□□□ -0.13
CCDC58Q4VC31 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 AC105250.1-201ENST00000509378 2057 ntBASIC14.26□□□□□ -0.13
CCDC58Q4VC31 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CCDC58Q4VC31 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 HMGA1P7-201ENST00000406908 502 ntBASIC14.25□□□□□ -0.13
CCDC58Q4VC31 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 ACTL9-202ENST00000612068 1252 ntBASIC14.25□□□□□ -0.13
CCDC58Q4VC31 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC58Q4VC31 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms