Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM71Q2Q1W2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM71Q2Q1W2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM71Q2Q1W2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRIM71Q2Q1W2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRIM71Q2Q1W2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRIM71Q2Q1W2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM71Q2Q1W2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM71Q2Q1W2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM71Q2Q1W2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
TRIM71Q2Q1W2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRIM71Q2Q1W2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TRIM71Q2Q1W2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
TRIM71Q2Q1W2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 GOLGA2P4-201ENST00000441462 777 ntBASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM71Q2Q1W2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 MIR326-201ENST00000362220 95 ntBASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 AC243960.2-201ENST00000600996 747 ntBASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 AC091271.1-201ENST00000611877 1162 ntBASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 AC145423.3-201ENST00000615987 467 ntBASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM71Q2Q1W2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 AC006033.1-201ENST00000440505 426 ntBASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 AC023310.1-201ENST00000554836 735 ntBASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms