Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2B3Q16720 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
ATP2B3Q16720 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2B3Q16720 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2B3Q16720 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2B3Q16720 TOMM22P5-201ENST00000416399 439 ntBASIC19.4■□□□□ 0.7
ATP2B3Q16720 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ATP2B3Q16720 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP2B3Q16720 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2B3Q16720 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATP2B3Q16720 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2B3Q16720 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2B3Q16720 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP2B3Q16720 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
ATP2B3Q16720 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2B3Q16720 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2B3Q16720 LINC02447-202ENST00000501888 2146 ntBASIC19.4■□□□□ 0.7
ATP2B3Q16720 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2B3Q16720 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2B3Q16720 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
ATP2B3Q16720 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.39■□□□□ 0.7
ATP2B3Q16720 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP2B3Q16720 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.39■□□□□ 0.7
ATP2B3Q16720 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP2B3Q16720 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
ATP2B3Q16720 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ATP2B3Q16720 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP2B3Q16720 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ATP2B3Q16720 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP2B3Q16720 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.39■□□□□ 0.69
ATP2B3Q16720 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.39■□□□□ 0.69
ATP2B3Q16720 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
ATP2B3Q16720 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.39■□□□□ 0.69
ATP2B3Q16720 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ATP2B3Q16720 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 CLK3P2-201ENST00000427566 1453 ntBASIC19.39■□□□□ 0.69
ATP2B3Q16720 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP2B3Q16720 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ATP2B3Q16720 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2B3Q16720 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ATP2B3Q16720 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2B3Q16720 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2B3Q16720 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2B3Q16720 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2B3Q16720 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2B3Q16720 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2B3Q16720 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 RN7SL399P-201ENST00000471648 279 ntBASIC19.38■□□□□ 0.69
ATP2B3Q16720 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2B3Q16720 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 AC036164.1-201ENST00000570544 333 ntBASIC19.38■□□□□ 0.69
ATP2B3Q16720 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2B3Q16720 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.38■□□□□ 0.69
ATP2B3Q16720 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.38■□□□□ 0.69
ATP2B3Q16720 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2B3Q16720 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2B3Q16720 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATP2B3Q16720 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATP2B3Q16720 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ATP2B3Q16720 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms