Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNB1P98172 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNB1P98172 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
EFNB1P98172 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
EFNB1P98172 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
EFNB1P98172 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNB1P98172 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.15□□□□□ -0.14
EFNB1P98172 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 AL607033.1-201ENST00000623900 1599 ntBASIC14.15□□□□□ -0.14
EFNB1P98172 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
EFNB1P98172 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
EFNB1P98172 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNB1P98172 MRPL3P1-201ENST00000400109 1033 ntBASIC14.15□□□□□ -0.14
EFNB1P98172 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.15□□□□□ -0.14
EFNB1P98172 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
EFNB1P98172 PDPK2P-202ENST00000562415 1191 ntBASIC14.15□□□□□ -0.14
EFNB1P98172 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNB1P98172 AC145285.3-201ENST00000564603 959 ntBASIC14.15□□□□□ -0.14
EFNB1P98172 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.15□□□□□ -0.14
EFNB1P98172 AC027307.2-201ENST00000591252 911 ntBASIC14.15□□□□□ -0.14
EFNB1P98172 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.15□□□□□ -0.14
EFNB1P98172 AC064836.3-201ENST00000607928 673 ntBASIC14.15□□□□□ -0.14
EFNB1P98172 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.15□□□□□ -0.14
EFNB1P98172 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
EFNB1P98172 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNB1P98172 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.15□□□□□ -0.14
EFNB1P98172 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
EFNB1P98172 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.15□□□□□ -0.14
EFNB1P98172 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
EFNB1P98172 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNB1P98172 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
EFNB1P98172 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
EFNB1P98172 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.15□□□□□ -0.14
EFNB1P98172 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
EFNB1P98172 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
EFNB1P98172 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.14□□□□□ -0.15
EFNB1P98172 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.14□□□□□ -0.15
EFNB1P98172 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
EFNB1P98172 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.14□□□□□ -0.15
EFNB1P98172 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.14□□□□□ -0.15
EFNB1P98172 KRT18P56-201ENST00000507275 550 ntBASIC14.14□□□□□ -0.15
EFNB1P98172 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.14□□□□□ -0.15
EFNB1P98172 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.14□□□□□ -0.15
EFNB1P98172 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.14□□□□□ -0.15
EFNB1P98172 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.14□□□□□ -0.15
EFNB1P98172 AC034105.1-201ENST00000563488 319 ntBASIC14.14□□□□□ -0.15
EFNB1P98172 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.14□□□□□ -0.15
EFNB1P98172 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.14□□□□□ -0.15
EFNB1P98172 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.14□□□□□ -0.15
EFNB1P98172 RN7SL510P-201ENST00000581311 263 ntBASIC14.14□□□□□ -0.15
EFNB1P98172 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
EFNB1P98172 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
EFNB1P98172 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 REXO1L2P-201ENST00000425429 2069 ntBASIC14.14□□□□□ -0.15
EFNB1P98172 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
EFNB1P98172 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.14□□□□□ -0.15
EFNB1P98172 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
EFNB1P98172 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms