Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 DOC2GP-202ENST00000514950 1163 ntBASIC18.18■□□□□ 0.5
CHMP4BP1P59074 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 AC020765.3-201ENST00000613051 740 ntBASIC18.18■□□□□ 0.5
CHMP4BP1P59074 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP4BP1P59074 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 AP002490.2-201ENST00000524791 560 ntBASIC18.17■□□□□ 0.5
CHMP4BP1P59074 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 AC008494.3-201ENST00000606615 944 ntBASIC18.17■□□□□ 0.5
CHMP4BP1P59074 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 AC144831.1-201ENST00000573312 2656 ntBASIC18.17■□□□□ 0.5
CHMP4BP1P59074 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.17■□□□□ 0.5
CHMP4BP1P59074 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP4BP1P59074 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 CU639417.3-201ENST00000624240 1404 ntBASIC18.16■□□□□ 0.5
CHMP4BP1P59074 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 AC010336.2-201ENST00000564226 506 ntBASIC18.16■□□□□ 0.5
CHMP4BP1P59074 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP4BP1P59074 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms