Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFRA1P56159 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.15□□□□□ -0.14
GFRA1P56159 AP006294.1-201ENST00000415407 339 ntBASIC14.15□□□□□ -0.14
GFRA1P56159 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.15□□□□□ -0.14
GFRA1P56159 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.15□□□□□ -0.14
GFRA1P56159 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.15□□□□□ -0.14
GFRA1P56159 AC104596.2-201ENST00000512793 793 ntBASIC14.15□□□□□ -0.14
GFRA1P56159 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.15□□□□□ -0.14
GFRA1P56159 AC092552.1-201ENST00000547243 906 ntBASIC14.15□□□□□ -0.14
GFRA1P56159 AC000095.1-201ENST00000603208 874 ntBASIC14.15□□□□□ -0.14
GFRA1P56159 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.15□□□□□ -0.14
GFRA1P56159 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
GFRA1P56159 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
GFRA1P56159 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFRA1P56159 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GFRA1P56159 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
GFRA1P56159 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFRA1P56159 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.15□□□□□ -0.14
GFRA1P56159 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFRA1P56159 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GFRA1P56159 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.15□□□□□ -0.14
GFRA1P56159 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFRA1P56159 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFRA1P56159 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GFRA1P56159 AL121723.1-201ENST00000445194 1519 ntBASIC14.15□□□□□ -0.14
GFRA1P56159 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GFRA1P56159 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFRA1P56159 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFRA1P56159 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFRA1P56159 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
GFRA1P56159 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GFRA1P56159 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
GFRA1P56159 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GFRA1P56159 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GFRA1P56159 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.14□□□□□ -0.15
GFRA1P56159 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.14□□□□□ -0.15
GFRA1P56159 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.14□□□□□ -0.15
GFRA1P56159 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.14□□□□□ -0.15
GFRA1P56159 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.14□□□□□ -0.15
GFRA1P56159 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GFRA1P56159 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.14□□□□□ -0.15
GFRA1P56159 AC005034.1-201ENST00000426657 489 ntBASIC14.14□□□□□ -0.15
GFRA1P56159 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GFRA1P56159 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.14□□□□□ -0.15
GFRA1P56159 FAM86LP-201ENST00000478302 853 ntBASIC14.14□□□□□ -0.15
GFRA1P56159 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.14□□□□□ -0.15
GFRA1P56159 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.14□□□□□ -0.15
GFRA1P56159 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.14□□□□□ -0.15
GFRA1P56159 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.14□□□□□ -0.15
GFRA1P56159 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.14□□□□□ -0.15
GFRA1P56159 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 AL035252.4-201ENST00000624174 288 ntBASIC14.14□□□□□ -0.15
GFRA1P56159 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
GFRA1P56159 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GFRA1P56159 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.14□□□□□ -0.15
GFRA1P56159 AC063926.2-201ENST00000623766 1308 ntBASIC14.14□□□□□ -0.15
GFRA1P56159 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GFRA1P56159 LINC02199-201ENST00000506655 2702 ntBASIC14.14□□□□□ -0.15
GFRA1P56159 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.13□□□□□ -0.15
GFRA1P56159 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GFRA1P56159 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.13□□□□□ -0.15
GFRA1P56159 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
GFRA1P56159 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.13□□□□□ -0.15
GFRA1P56159 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 PCDHA1-201ENST00000378133 2726 ntBASIC14.13□□□□□ -0.15
GFRA1P56159 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GFRA1P56159 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GFRA1P56159 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
GFRA1P56159 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms