Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAD23BP54727 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAD23BP54727 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.97■□□□□ 0.31
RAD23BP54727 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RAD23BP54727 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.97■□□□□ 0.31
RAD23BP54727 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAD23BP54727 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAD23BP54727 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAD23BP54727 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.97■□□□□ 0.31
RAD23BP54727 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAD23BP54727 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RAD23BP54727 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.97■□□□□ 0.31
RAD23BP54727 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAD23BP54727 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAD23BP54727 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.97■□□□□ 0.31
RAD23BP54727 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.97■□□□□ 0.31
RAD23BP54727 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
RAD23BP54727 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.96■□□□□ 0.31
RAD23BP54727 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.96■□□□□ 0.31
RAD23BP54727 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RAD23BP54727 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.96■□□□□ 0.31
RAD23BP54727 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.96■□□□□ 0.31
RAD23BP54727 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RAD23BP54727 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.96■□□□□ 0.31
RAD23BP54727 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
RAD23BP54727 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RAD23BP54727 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.96■□□□□ 0.31
RAD23BP54727 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.96■□□□□ 0.31
RAD23BP54727 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.96■□□□□ 0.31
RAD23BP54727 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.96■□□□□ 0.31
RAD23BP54727 AC241585.1-201ENST00000433527 519 ntBASIC16.96■□□□□ 0.31
RAD23BP54727 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RAD23BP54727 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RAD23BP54727 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.96■□□□□ 0.31
RAD23BP54727 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.96■□□□□ 0.31
RAD23BP54727 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.96■□□□□ 0.31
RAD23BP54727 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.96■□□□□ 0.31
RAD23BP54727 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.96■□□□□ 0.31
RAD23BP54727 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.96■□□□□ 0.31
RAD23BP54727 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
RAD23BP54727 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.96■□□□□ 0.31
RAD23BP54727 AC010336.2-201ENST00000564226 506 ntBASIC16.96■□□□□ 0.31
RAD23BP54727 MIR6069-201ENST00000620069 79 ntBASIC16.96■□□□□ 0.31
RAD23BP54727 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.96■□□□□ 0.31
RAD23BP54727 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.96■□□□□ 0.31
RAD23BP54727 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.96■□□□□ 0.31
RAD23BP54727 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.96■□□□□ 0.31
RAD23BP54727 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.96■□□□□ 0.31
RAD23BP54727 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.96■□□□□ 0.31
RAD23BP54727 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RAD23BP54727 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAD23BP54727 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
RAD23BP54727 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RAD23BP54727 AC104640.1-201ENST00000562617 2109 ntBASIC16.96■□□□□ 0.3
RAD23BP54727 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.96■□□□□ 0.3
RAD23BP54727 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RAD23BP54727 AC087499.5-201ENST00000452760 1342 ntBASIC16.96■□□□□ 0.3
RAD23BP54727 PRAL-201ENST00000624952 3286 ntBASIC16.95■□□□□ 0.3
RAD23BP54727 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.95■□□□□ 0.3
RAD23BP54727 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RAD23BP54727 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.95■□□□□ 0.3
RAD23BP54727 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.95■□□□□ 0.3
RAD23BP54727 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RAD23BP54727 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RAD23BP54727 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RAD23BP54727 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RAD23BP54727 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RAD23BP54727 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.95■□□□□ 0.3
RAD23BP54727 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAD23BP54727 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.95■□□□□ 0.3
RAD23BP54727 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.95■□□□□ 0.3
RAD23BP54727 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.95■□□□□ 0.3
RAD23BP54727 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.95■□□□□ 0.3
RAD23BP54727 SERBP1P3-201ENST00000459980 809 ntBASIC16.95■□□□□ 0.3
RAD23BP54727 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.95■□□□□ 0.3
RAD23BP54727 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.95■□□□□ 0.3
RAD23BP54727 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms