Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEK3P51956 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEK3P51956 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEK3P51956 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.39■□□□□ 0.21
NEK3P51956 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.39■□□□□ 0.21
NEK3P51956 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NEK3P51956 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEK3P51956 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NEK3P51956 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.38■□□□□ 0.21
NEK3P51956 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NEK3P51956 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NEK3P51956 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.38■□□□□ 0.21
NEK3P51956 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.38■□□□□ 0.21
NEK3P51956 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.38■□□□□ 0.21
NEK3P51956 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
NEK3P51956 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NEK3P51956 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NEK3P51956 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 AC241585.1-201ENST00000433527 519 ntBASIC16.38■□□□□ 0.21
NEK3P51956 MTND6P24-201ENST00000440466 518 ntBASIC16.38■□□□□ 0.21
NEK3P51956 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.38■□□□□ 0.21
NEK3P51956 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.38■□□□□ 0.21
NEK3P51956 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
NEK3P51956 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.38■□□□□ 0.21
NEK3P51956 AC105021.1-202ENST00000570572 669 ntBASIC16.38■□□□□ 0.21
NEK3P51956 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.38■□□□□ 0.21
NEK3P51956 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.38■□□□□ 0.21
NEK3P51956 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.38■□□□□ 0.21
NEK3P51956 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.38■□□□□ 0.21
NEK3P51956 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
NEK3P51956 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.38■□□□□ 0.21
NEK3P51956 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NEK3P51956 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.38■□□□□ 0.21
NEK3P51956 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.38■□□□□ 0.21
NEK3P51956 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NEK3P51956 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.38■□□□□ 0.21
NEK3P51956 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NEK3P51956 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEK3P51956 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.37■□□□□ 0.21
NEK3P51956 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NEK3P51956 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.37■□□□□ 0.21
NEK3P51956 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NEK3P51956 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEK3P51956 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.37■□□□□ 0.21
NEK3P51956 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEK3P51956 AC005622.1-201ENST00000636801 1703 ntBASIC16.37■□□□□ 0.21
NEK3P51956 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEK3P51956 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NEK3P51956 SSR4P1-203ENST00000599569 2260 ntBASIC16.37■□□□□ 0.21
NEK3P51956 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEK3P51956 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
NEK3P51956 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
NEK3P51956 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NEK3P51956 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NEK3P51956 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEK3P51956 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NEK3P51956 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.37■□□□□ 0.21
NEK3P51956 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.37■□□□□ 0.21
NEK3P51956 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NEK3P51956 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NEK3P51956 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.37■□□□□ 0.21
NEK3P51956 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEK3P51956 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEK3P51956 HLA-V-204ENST00000476601 1289 ntBASIC16.37■□□□□ 0.21
NEK3P51956 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.37■□□□□ 0.21
NEK3P51956 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.37■□□□□ 0.21
NEK3P51956 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.37■□□□□ 0.21
NEK3P51956 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NEK3P51956 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NEK3P51956 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.37■□□□□ 0.21
NEK3P51956 MIR4745-201ENST00000577608 62 ntBASIC16.37■□□□□ 0.21
NEK3P51956 RN7SL828P-201ENST00000607615 303 ntBASIC16.37■□□□□ 0.21
NEK3P51956 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
NEK3P51956 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
NEK3P51956 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
NEK3P51956 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.37■□□□□ 0.21
NEK3P51956 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms