Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.16■□□□□ 0.02
PRIM2P49643 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.16■□□□□ 0.02
PRIM2P49643 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PRIM2P49643 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.16■□□□□ 0.02
PRIM2P49643 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.16■□□□□ 0.02
PRIM2P49643 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
PRIM2P49643 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.16■□□□□ 0.02
PRIM2P49643 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.16■□□□□ 0.02
PRIM2P49643 AC004832.2-201ENST00000426397 482 ntBASIC15.16■□□□□ 0.02
PRIM2P49643 ACTG1P14-201ENST00000446382 1122 ntBASIC15.16■□□□□ 0.02
PRIM2P49643 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.16■□□□□ 0.02
PRIM2P49643 AC098859.1-201ENST00000502915 1238 ntBASIC15.16■□□□□ 0.02
PRIM2P49643 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.16■□□□□ 0.02
PRIM2P49643 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.16■□□□□ 0.02
PRIM2P49643 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.16■□□□□ 0.02
PRIM2P49643 MIR4321-201ENST00000592276 80 ntBASIC15.16■□□□□ 0.02
PRIM2P49643 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PRIM2P49643 MTDHP5-201ENST00000598980 586 ntBASIC15.16■□□□□ 0.02
PRIM2P49643 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PRIM2P49643 AC008267.7-201ENST00000624570 1194 ntBASIC15.16■□□□□ 0.02
PRIM2P49643 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
PRIM2P49643 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.16■□□□□ 0.02
PRIM2P49643 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 AC013268.4-201ENST00000637413 2228 ntBASIC15.16■□□□□ 0.02
PRIM2P49643 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.16■□□□□ 0.02
PRIM2P49643 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 AC006058.4-201ENST00000624016 1670 ntBASIC15.16■□□□□ 0.02
PRIM2P49643 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.16■□□□□ 0.02
PRIM2P49643 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.15■□□□□ 0.02
PRIM2P49643 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PRIM2P49643 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.15■□□□□ 0.02
PRIM2P49643 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 YBX2P1-201ENST00000394192 760 ntBASIC15.15■□□□□ 0.02
PRIM2P49643 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.15■□□□□ 0.02
PRIM2P49643 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.15■□□□□ 0.02
PRIM2P49643 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.15■□□□□ 0.02
PRIM2P49643 SPDYE11-202ENST00000450699 704 ntBASIC15.15■□□□□ 0.02
PRIM2P49643 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PRIM2P49643 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.15■□□□□ 0.02
PRIM2P49643 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.15■□□□□ 0.02
PRIM2P49643 SPDYE9P-201ENST00000570642 692 ntBASIC15.15■□□□□ 0.02
PRIM2P49643 AC024267.1-201ENST00000582320 895 ntBASIC15.15■□□□□ 0.02
PRIM2P49643 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.15■□□□□ 0.02
PRIM2P49643 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.15■□□□□ 0.02
PRIM2P49643 AC027307.2-201ENST00000591252 911 ntBASIC15.15■□□□□ 0.02
PRIM2P49643 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.15■□□□□ 0.02
PRIM2P49643 SPDYE10P-202ENST00000612005 668 ntBASIC15.15■□□□□ 0.02
PRIM2P49643 SPDYE8P-202ENST00000612377 668 ntBASIC15.15■□□□□ 0.02
PRIM2P49643 SPTSSB-204ENST00000617024 1292 ntBASIC15.15■□□□□ 0.02
PRIM2P49643 AC092902.6-201ENST00000641783 218 ntBASIC15.15■□□□□ 0.02
PRIM2P49643 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PRIM2P49643 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PRIM2P49643 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
PRIM2P49643 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 CICP13-201ENST00000422015 2789 ntBASIC15.15■□□□□ 0.02
PRIM2P49643 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
PRIM2P49643 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRIM2P49643 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.14■□□□□ 0.01
PRIM2P49643 SSR4P1-203ENST00000599569 2260 ntBASIC15.14■□□□□ 0.01
PRIM2P49643 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.14■□□□□ 0.01
PRIM2P49643 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms