Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
APOBEC1P41238 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.34□□□□□ -0.11
APOBEC1P41238 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
APOBEC1P41238 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOBEC1P41238 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.33□□□□□ -0.11
APOBEC1P41238 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOBEC1P41238 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOBEC1P41238 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
APOBEC1P41238 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.33□□□□□ -0.11
APOBEC1P41238 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
APOBEC1P41238 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.33□□□□□ -0.11
APOBEC1P41238 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.33□□□□□ -0.11
APOBEC1P41238 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOBEC1P41238 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOBEC1P41238 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.33□□□□□ -0.12
APOBEC1P41238 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
APOBEC1P41238 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOBEC1P41238 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOBEC1P41238 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOBEC1P41238 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.33□□□□□ -0.12
APOBEC1P41238 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.33□□□□□ -0.12
APOBEC1P41238 PMS2P2-201ENST00000425039 1128 ntBASIC14.33□□□□□ -0.12
APOBEC1P41238 AC092580.3-201ENST00000430932 139 ntBASIC14.33□□□□□ -0.12
APOBEC1P41238 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.33□□□□□ -0.12
APOBEC1P41238 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.33□□□□□ -0.12
APOBEC1P41238 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOBEC1P41238 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.33□□□□□ -0.12
APOBEC1P41238 IGHV3-42-201ENST00000520410 361 ntBASIC14.33□□□□□ -0.12
APOBEC1P41238 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOBEC1P41238 DUX4L27-201ENST00000554796 1261 ntBASIC14.33□□□□□ -0.12
APOBEC1P41238 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.33□□□□□ -0.12
APOBEC1P41238 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.33□□□□□ -0.12
APOBEC1P41238 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.33□□□□□ -0.12
APOBEC1P41238 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.33□□□□□ -0.12
APOBEC1P41238 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOBEC1P41238 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.33□□□□□ -0.12
APOBEC1P41238 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOBEC1P41238 AL607033.1-201ENST00000623900 1599 ntBASIC14.33□□□□□ -0.12
APOBEC1P41238 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOBEC1P41238 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
APOBEC1P41238 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
APOBEC1P41238 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
APOBEC1P41238 Z97205.2-201ENST00000564697 1639 ntBASIC14.33□□□□□ -0.12
APOBEC1P41238 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
APOBEC1P41238 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.33□□□□□ -0.12
APOBEC1P41238 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOBEC1P41238 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOBEC1P41238 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.33□□□□□ -0.12
APOBEC1P41238 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
APOBEC1P41238 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
APOBEC1P41238 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.32□□□□□ -0.12
APOBEC1P41238 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.32□□□□□ -0.12
APOBEC1P41238 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
APOBEC1P41238 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.32□□□□□ -0.12
APOBEC1P41238 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.32□□□□□ -0.12
APOBEC1P41238 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.32□□□□□ -0.12
APOBEC1P41238 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 AC055876.3-201ENST00000431496 288 ntBASIC14.32□□□□□ -0.12
APOBEC1P41238 AC241585.1-201ENST00000433527 519 ntBASIC14.32□□□□□ -0.12
APOBEC1P41238 TARDBPP1-201ENST00000442013 1203 ntBASIC14.32□□□□□ -0.12
APOBEC1P41238 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.32□□□□□ -0.12
APOBEC1P41238 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.32□□□□□ -0.12
APOBEC1P41238 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.32□□□□□ -0.12
APOBEC1P41238 SDHAP3-202ENST00000515467 728 ntBASIC14.32□□□□□ -0.12
APOBEC1P41238 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.32□□□□□ -0.12
APOBEC1P41238 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.32□□□□□ -0.12
APOBEC1P41238 ZNF890P-202ENST00000530367 1156 ntBASIC14.32□□□□□ -0.12
APOBEC1P41238 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.32□□□□□ -0.12
APOBEC1P41238 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.32□□□□□ -0.12
APOBEC1P41238 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.32□□□□□ -0.12
APOBEC1P41238 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.32□□□□□ -0.12
APOBEC1P41238 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.32□□□□□ -0.12
APOBEC1P41238 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.32□□□□□ -0.12
APOBEC1P41238 AC138649.4-201ENST00000612222 287 ntBASIC14.32□□□□□ -0.12
APOBEC1P41238 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
APOBEC1P41238 AL590560.3-201ENST00000623350 461 ntBASIC14.32□□□□□ -0.12
APOBEC1P41238 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOBEC1P41238 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
APOBEC1P41238 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms