Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.09■□□□□ 0.17
HADHAP40939 PMS2P2-201ENST00000425039 1128 ntBASIC16.09■□□□□ 0.17
HADHAP40939 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.09■□□□□ 0.17
HADHAP40939 SPDYE14P-201ENST00000442619 822 ntBASIC16.09■□□□□ 0.17
HADHAP40939 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.09■□□□□ 0.17
HADHAP40939 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 AC026150.2-201ENST00000564693 1156 ntBASIC16.09■□□□□ 0.17
HADHAP40939 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.09■□□□□ 0.17
HADHAP40939 AP001059.3-201ENST00000619053 235 ntBASIC16.09■□□□□ 0.17
HADHAP40939 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.09■□□□□ 0.17
HADHAP40939 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.09■□□□□ 0.17
HADHAP40939 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.09■□□□□ 0.17
HADHAP40939 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.09■□□□□ 0.17
HADHAP40939 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.09■□□□□ 0.17
HADHAP40939 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.09■□□□□ 0.17
HADHAP40939 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HADHAP40939 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
HADHAP40939 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
HADHAP40939 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
HADHAP40939 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.08■□□□□ 0.17
HADHAP40939 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HADHAP40939 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HADHAP40939 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
HADHAP40939 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.08■□□□□ 0.16
HADHAP40939 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.08■□□□□ 0.16
HADHAP40939 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.08■□□□□ 0.16
HADHAP40939 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
HADHAP40939 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.08■□□□□ 0.16
HADHAP40939 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.08■□□□□ 0.16
HADHAP40939 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HADHAP40939 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
HADHAP40939 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.08■□□□□ 0.16
HADHAP40939 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.08■□□□□ 0.16
HADHAP40939 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.08■□□□□ 0.16
HADHAP40939 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.08■□□□□ 0.16
HADHAP40939 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HADHAP40939 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
HADHAP40939 PPT1-215ENST00000641471 2368 ntBASIC16.08■□□□□ 0.16
HADHAP40939 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
HADHAP40939 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
HADHAP40939 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HADHAP40939 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
HADHAP40939 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HADHAP40939 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HADHAP40939 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HADHAP40939 AC134407.2-201ENST00000625089 1978 ntBASIC16.07■□□□□ 0.16
HADHAP40939 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.07■□□□□ 0.16
HADHAP40939 AC013268.4-201ENST00000637413 2228 ntBASIC16.07■□□□□ 0.16
HADHAP40939 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HADHAP40939 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HADHAP40939 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.07■□□□□ 0.16
HADHAP40939 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.07■□□□□ 0.16
HADHAP40939 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.07■□□□□ 0.16
HADHAP40939 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 AL512356.2-201ENST00000546955 174 ntBASIC16.07■□□□□ 0.16
HADHAP40939 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
HADHAP40939 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.07■□□□□ 0.16
HADHAP40939 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.07■□□□□ 0.16
HADHAP40939 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HADHAP40939 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
HADHAP40939 AC027612.4-201ENST00000605371 583 ntBASIC16.07■□□□□ 0.16
HADHAP40939 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms