Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CKS2P33552 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.74□□□□□ -0.53
CKS2P33552 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS2P33552 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
CKS2P33552 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.74□□□□□ -0.53
CKS2P33552 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.74□□□□□ -0.53
CKS2P33552 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CKS2P33552 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CKS2P33552 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.73□□□□□ -0.53
CKS2P33552 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.73□□□□□ -0.53
CKS2P33552 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CKS2P33552 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CKS2P33552 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
CKS2P33552 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.73□□□□□ -0.53
CKS2P33552 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CKS2P33552 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CKS2P33552 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.73□□□□□ -0.53
CKS2P33552 HCG4-201ENST00000418983 998 ntBASIC11.73□□□□□ -0.53
CKS2P33552 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.73□□□□□ -0.53
CKS2P33552 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CKS2P33552 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.73□□□□□ -0.53
CKS2P33552 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC11.73□□□□□ -0.53
CKS2P33552 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.73□□□□□ -0.53
CKS2P33552 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.73□□□□□ -0.53
CKS2P33552 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 AL160237.2-201ENST00000556165 472 ntBASIC11.73□□□□□ -0.53
CKS2P33552 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.73□□□□□ -0.53
CKS2P33552 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CKS2P33552 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CKS2P33552 Z69720.1-201ENST00000601483 472 ntBASIC11.73□□□□□ -0.53
CKS2P33552 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.73□□□□□ -0.53
CKS2P33552 AC005912.2-201ENST00000619492 2400 ntBASIC11.73□□□□□ -0.53
CKS2P33552 AF228730.7-201ENST00000641842 219 ntBASIC11.73□□□□□ -0.53
CKS2P33552 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
CKS2P33552 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 AC117489.1-201ENST00000625169 3217 ntBASIC11.73□□□□□ -0.53
CKS2P33552 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CKS2P33552 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CKS2P33552 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CKS2P33552 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.72□□□□□ -0.53
CKS2P33552 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.72□□□□□ -0.53
CKS2P33552 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.72□□□□□ -0.53
CKS2P33552 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.72□□□□□ -0.53
CKS2P33552 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CKS2P33552 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.72□□□□□ -0.53
CKS2P33552 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.72□□□□□ -0.53
CKS2P33552 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.72□□□□□ -0.53
CKS2P33552 ABCD1P5-201ENST00000445663 754 ntBASIC11.72□□□□□ -0.53
CKS2P33552 PRYP5-201ENST00000451909 266 ntBASIC11.72□□□□□ -0.53
CKS2P33552 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC11.72□□□□□ -0.53
CKS2P33552 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
CKS2P33552 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.72□□□□□ -0.53
CKS2P33552 AC064862.7-201ENST00000604520 867 ntBASIC11.72□□□□□ -0.53
CKS2P33552 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CKS2P33552 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms