Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSP1P33241 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
LSP1P33241 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LSP1P33241 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.97■□□□□ 0.15
LSP1P33241 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
LSP1P33241 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.97■□□□□ 0.15
LSP1P33241 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.97■□□□□ 0.15
LSP1P33241 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.97■□□□□ 0.15
LSP1P33241 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LSP1P33241 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LSP1P33241 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.97■□□□□ 0.15
LSP1P33241 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.97■□□□□ 0.15
LSP1P33241 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LSP1P33241 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.97■□□□□ 0.15
LSP1P33241 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.97■□□□□ 0.15
LSP1P33241 AL645929.1-201ENST00000420084 975 ntBASIC15.97■□□□□ 0.15
LSP1P33241 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.97■□□□□ 0.15
LSP1P33241 AC087388.1-201ENST00000571370 1112 ntBASIC15.97■□□□□ 0.15
LSP1P33241 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.97■□□□□ 0.15
LSP1P33241 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.97■□□□□ 0.15
LSP1P33241 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.97■□□□□ 0.15
LSP1P33241 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LSP1P33241 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.97■□□□□ 0.15
LSP1P33241 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.97■□□□□ 0.15
LSP1P33241 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LSP1P33241 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LSP1P33241 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.96■□□□□ 0.15
LSP1P33241 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LSP1P33241 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LSP1P33241 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LSP1P33241 CICP8-201ENST00000455800 2813 ntBASIC15.96■□□□□ 0.15
LSP1P33241 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LSP1P33241 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
LSP1P33241 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.96■□□□□ 0.15
LSP1P33241 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.96■□□□□ 0.15
LSP1P33241 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
LSP1P33241 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.96■□□□□ 0.15
LSP1P33241 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LSP1P33241 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.96■□□□□ 0.15
LSP1P33241 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.96■□□□□ 0.15
LSP1P33241 PRYP5-201ENST00000451909 266 ntBASIC15.96■□□□□ 0.15
LSP1P33241 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.96■□□□□ 0.15
LSP1P33241 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.96■□□□□ 0.15
LSP1P33241 AC096582.2-201ENST00000510860 516 ntBASIC15.96■□□□□ 0.15
LSP1P33241 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.96■□□□□ 0.15
LSP1P33241 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.96■□□□□ 0.15
LSP1P33241 AC005412.3-201ENST00000580309 715 ntBASIC15.96■□□□□ 0.15
LSP1P33241 AL139424.1-201ENST00000607572 797 ntBASIC15.96■□□□□ 0.15
LSP1P33241 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.96■□□□□ 0.15
LSP1P33241 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.96■□□□□ 0.15
LSP1P33241 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LSP1P33241 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LSP1P33241 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSP1P33241 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.96■□□□□ 0.15
LSP1P33241 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LSP1P33241 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.96■□□□□ 0.14
LSP1P33241 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LSP1P33241 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms