Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.12□□□□□ -0.15
HOXC12P31275 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.12□□□□□ -0.15
HOXC12P31275 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
HOXC12P31275 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.12□□□□□ -0.15
HOXC12P31275 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HOXC12P31275 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.11□□□□□ -0.15
HOXC12P31275 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HOXC12P31275 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.11□□□□□ -0.15
HOXC12P31275 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HOXC12P31275 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
HOXC12P31275 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 RN7SL618P-201ENST00000477850 296 ntBASIC14.11□□□□□ -0.15
HOXC12P31275 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.11□□□□□ -0.15
HOXC12P31275 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.11□□□□□ -0.15
HOXC12P31275 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HOXC12P31275 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.11□□□□□ -0.15
HOXC12P31275 AL138828.2-201ENST00000615812 383 ntBASIC14.11□□□□□ -0.15
HOXC12P31275 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
HOXC12P31275 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HOXC12P31275 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.11□□□□□ -0.15
HOXC12P31275 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HOXC12P31275 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
HOXC12P31275 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.1□□□□□ -0.15
HOXC12P31275 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HOXC12P31275 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
HOXC12P31275 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HOXC12P31275 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HOXC12P31275 TCAF2P1-201ENST00000291129 2421 ntBASIC14.1□□□□□ -0.15
HOXC12P31275 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.1□□□□□ -0.15
HOXC12P31275 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HOXC12P31275 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
HOXC12P31275 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HOXC12P31275 AC098614.1-201ENST00000368528 745 ntBASIC14.1□□□□□ -0.15
HOXC12P31275 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HOXC12P31275 MIR648-201ENST00000385046 94 ntBASIC14.1□□□□□ -0.15
HOXC12P31275 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.1□□□□□ -0.15
HOXC12P31275 AL353779.1-201ENST00000434793 351 ntBASIC14.1□□□□□ -0.15
HOXC12P31275 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.1□□□□□ -0.15
HOXC12P31275 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.1□□□□□ -0.15
HOXC12P31275 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.1□□□□□ -0.15
HOXC12P31275 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HOXC12P31275 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.1□□□□□ -0.15
HOXC12P31275 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.1□□□□□ -0.15
HOXC12P31275 AL079307.3-201ENST00000556114 283 ntBASIC14.1□□□□□ -0.15
HOXC12P31275 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.1□□□□□ -0.15
HOXC12P31275 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.1□□□□□ -0.15
HOXC12P31275 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.1□□□□□ -0.15
HOXC12P31275 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HOXC12P31275 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HOXC12P31275 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HOXC12P31275 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HOXC12P31275 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HOXC12P31275 AP001282.1-201ENST00000531301 1499 ntBASIC14.1□□□□□ -0.15
HOXC12P31275 AC138969.3-201ENST00000546612 1459 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms