Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.38□□□□□ -0.11
GDF1P27539 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.38□□□□□ -0.11
GDF1P27539 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDF1P27539 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.38□□□□□ -0.11
GDF1P27539 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.37□□□□□ -0.11
GDF1P27539 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 AC011477.6-201ENST00000604980 1927 ntBASIC14.37□□□□□ -0.11
GDF1P27539 AC018892.3-201ENST00000623986 2499 ntBASIC14.37□□□□□ -0.11
GDF1P27539 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
GDF1P27539 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
GDF1P27539 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
GDF1P27539 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.37□□□□□ -0.11
GDF1P27539 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.37□□□□□ -0.11
GDF1P27539 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
GDF1P27539 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.37□□□□□ -0.11
GDF1P27539 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.37□□□□□ -0.11
GDF1P27539 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GDF1P27539 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.37□□□□□ -0.11
GDF1P27539 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.37□□□□□ -0.11
GDF1P27539 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.37□□□□□ -0.11
GDF1P27539 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.37□□□□□ -0.11
GDF1P27539 HNRNPUP1-201ENST00000554987 333 ntBASIC14.37□□□□□ -0.11
GDF1P27539 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
GDF1P27539 AC008494.3-201ENST00000606615 944 ntBASIC14.37□□□□□ -0.11
GDF1P27539 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.37□□□□□ -0.11
GDF1P27539 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.37□□□□□ -0.11
GDF1P27539 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
GDF1P27539 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.37□□□□□ -0.11
GDF1P27539 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.37□□□□□ -0.11
GDF1P27539 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 CYP2T1P-202ENST00000641596 2535 ntBASIC14.37□□□□□ -0.11
GDF1P27539 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDF1P27539 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
GDF1P27539 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 AP003680.1-201ENST00000598970 3660 ntBASIC14.36□□□□□ -0.11
GDF1P27539 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.36□□□□□ -0.11
GDF1P27539 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.36□□□□□ -0.11
GDF1P27539 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.36□□□□□ -0.11
GDF1P27539 PCDHB19P-201ENST00000570871 2371 ntBASIC14.36□□□□□ -0.11
GDF1P27539 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.36□□□□□ -0.11
GDF1P27539 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GDF1P27539 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.36□□□□□ -0.11
GDF1P27539 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.36□□□□□ -0.11
GDF1P27539 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.36□□□□□ -0.11
GDF1P27539 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.36□□□□□ -0.11
GDF1P27539 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GDF1P27539 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.36□□□□□ -0.11
GDF1P27539 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.36□□□□□ -0.11
GDF1P27539 CHCHD2P3-201ENST00000603038 451 ntBASIC14.36□□□□□ -0.11
GDF1P27539 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
GDF1P27539 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
GDF1P27539 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GDF1P27539 AL035252.4-201ENST00000624174 288 ntBASIC14.36□□□□□ -0.11
GDF1P27539 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.36□□□□□ -0.11
GDF1P27539 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
GDF1P27539 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.36□□□□□ -0.11
GDF1P27539 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.36□□□□□ -0.11
GDF1P27539 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.36□□□□□ -0.11
GDF1P27539 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.36□□□□□ -0.11
GDF1P27539 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GDF1P27539 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms