Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN3P26045 CETN4P-206ENST00000642099 2168 ntBASIC16.16■□□□□ 0.18
PTPN3P26045 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN3P26045 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.16■□□□□ 0.18
PTPN3P26045 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.16■□□□□ 0.18
PTPN3P26045 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.16■□□□□ 0.18
PTPN3P26045 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN3P26045 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.16■□□□□ 0.18
PTPN3P26045 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PTPN3P26045 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PTPN3P26045 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN3P26045 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PTPN3P26045 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.16■□□□□ 0.18
PTPN3P26045 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN3P26045 AC139530.3-201ENST00000620344 690 ntBASIC16.16■□□□□ 0.18
PTPN3P26045 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PTPN3P26045 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN3P26045 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.16■□□□□ 0.18
PTPN3P26045 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PTPN3P26045 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTPN3P26045 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTPN3P26045 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.16■□□□□ 0.18
PTPN3P26045 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.16■□□□□ 0.18
PTPN3P26045 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PTPN3P26045 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.16■□□□□ 0.18
PTPN3P26045 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTPN3P26045 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN3P26045 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PTPN3P26045 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PTPN3P26045 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PTPN3P26045 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN3P26045 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 RPL37AP1-201ENST00000412502 279 ntBASIC16.15■□□□□ 0.18
PTPN3P26045 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN3P26045 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 CNN2P2-201ENST00000443536 909 ntBASIC16.15■□□□□ 0.18
PTPN3P26045 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
PTPN3P26045 CNN2P3-201ENST00000450201 906 ntBASIC16.15■□□□□ 0.18
PTPN3P26045 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN3P26045 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN3P26045 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN3P26045 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.15■□□□□ 0.18
PTPN3P26045 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN3P26045 AC004449.1-201ENST00000564240 433 ntBASIC16.15■□□□□ 0.18
PTPN3P26045 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.15■□□□□ 0.18
PTPN3P26045 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.15■□□□□ 0.18
PTPN3P26045 AL136317.3-201ENST00000618497 906 ntBASIC16.15■□□□□ 0.18
PTPN3P26045 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN3P26045 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PTPN3P26045 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 TUBB3P1-201ENST00000405796 1332 ntBASIC16.15■□□□□ 0.18
PTPN3P26045 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN3P26045 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 FLJ16779-201ENST00000612722 7638 ntBASIC16.15■□□□□ 0.18
PTPN3P26045 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.15■□□□□ 0.18
PTPN3P26045 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.15■□□□□ 0.18
PTPN3P26045 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTPN3P26045 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PTPN3P26045 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.14■□□□□ 0.18
PTPN3P26045 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PTPN3P26045 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.18
PTPN3P26045 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.14■□□□□ 0.17
PTPN3P26045 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTPN3P26045 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms