Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40P25942 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 AC069224.1-201ENST00000566372 1715 ntBASIC13.64□□□□□ -0.23
CD40P25942 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40P25942 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40P25942 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.64□□□□□ -0.23
CD40P25942 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40P25942 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 AL512384.1-201ENST00000406683 331 ntBASIC13.64□□□□□ -0.23
CD40P25942 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
CD40P25942 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CD40P25942 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.64□□□□□ -0.23
CD40P25942 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40P25942 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CD40P25942 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40P25942 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.64□□□□□ -0.23
CD40P25942 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.64□□□□□ -0.23
CD40P25942 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.64□□□□□ -0.23
CD40P25942 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.64□□□□□ -0.23
CD40P25942 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.64□□□□□ -0.23
CD40P25942 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.64□□□□□ -0.23
CD40P25942 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CD40P25942 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.64□□□□□ -0.23
CD40P25942 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD40P25942 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.64□□□□□ -0.23
CD40P25942 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.64□□□□□ -0.23
CD40P25942 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
CD40P25942 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.64□□□□□ -0.23
CD40P25942 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.64□□□□□ -0.23
CD40P25942 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.64□□□□□ -0.23
CD40P25942 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CD40P25942 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD40P25942 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.63□□□□□ -0.23
CD40P25942 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.63□□□□□ -0.23
CD40P25942 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.63□□□□□ -0.23
CD40P25942 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.63□□□□□ -0.23
CD40P25942 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CD40P25942 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CD40P25942 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.63□□□□□ -0.23
CD40P25942 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.63□□□□□ -0.23
CD40P25942 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.63□□□□□ -0.23
CD40P25942 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.63□□□□□ -0.23
CD40P25942 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.63□□□□□ -0.23
CD40P25942 AC092552.1-201ENST00000547243 906 ntBASIC13.63□□□□□ -0.23
CD40P25942 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.63□□□□□ -0.23
CD40P25942 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.63□□□□□ -0.23
CD40P25942 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.63□□□□□ -0.23
CD40P25942 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.63□□□□□ -0.23
CD40P25942 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
CD40P25942 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.63□□□□□ -0.23
CD40P25942 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.63□□□□□ -0.23
CD40P25942 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.63□□□□□ -0.23
CD40P25942 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CD40P25942 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CD40P25942 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.63□□□□□ -0.23
CD40P25942 AC124067.4-201ENST00000519691 2379 ntBASIC13.63□□□□□ -0.23
CD40P25942 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms