Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
XPAP23025 AL450472.2-201ENST00000603663 1156 ntBASIC16.02■□□□□ 0.16
XPAP23025 AC074044.1-201ENST00000609673 707 ntBASIC16.02■□□□□ 0.16
XPAP23025 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.02■□□□□ 0.16
XPAP23025 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.02■□□□□ 0.16
XPAP23025 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.02■□□□□ 0.16
XPAP23025 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.02■□□□□ 0.16
XPAP23025 AC004840.1-201ENST00000636359 365 ntBASIC16.02■□□□□ 0.16
XPAP23025 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
XPAP23025 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.02■□□□□ 0.15
XPAP23025 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.02■□□□□ 0.15
XPAP23025 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
XPAP23025 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
XPAP23025 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
XPAP23025 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
XPAP23025 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
XPAP23025 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
XPAP23025 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
XPAP23025 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.02■□□□□ 0.15
XPAP23025 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
XPAP23025 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
XPAP23025 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.01■□□□□ 0.15
XPAP23025 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.01■□□□□ 0.15
XPAP23025 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
XPAP23025 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.01■□□□□ 0.15
XPAP23025 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.01■□□□□ 0.15
XPAP23025 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.01■□□□□ 0.15
XPAP23025 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
XPAP23025 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.01■□□□□ 0.15
XPAP23025 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.01■□□□□ 0.15
XPAP23025 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
XPAP23025 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.01■□□□□ 0.15
XPAP23025 PHKG1P2-201ENST00000457537 863 ntBASIC16.01■□□□□ 0.15
XPAP23025 AC104794.3-201ENST00000566840 1248 ntBASIC16.01■□□□□ 0.15
XPAP23025 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
XPAP23025 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.01■□□□□ 0.15
XPAP23025 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.01■□□□□ 0.15
XPAP23025 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
XPAP23025 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.01■□□□□ 0.15
XPAP23025 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
XPAP23025 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
XPAP23025 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
XPAP23025 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
XPAP23025 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.01■□□□□ 0.15
XPAP23025 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.01■□□□□ 0.15
XPAP23025 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
XPAP23025 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
XPAP23025 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16■□□□□ 0.15
XPAP23025 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16■□□□□ 0.15
XPAP23025 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16■□□□□ 0.15
XPAP23025 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
XPAP23025 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
XPAP23025 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
XPAP23025 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16■□□□□ 0.15
XPAP23025 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
XPAP23025 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
XPAP23025 CYP2T1P-202ENST00000641596 2535 ntBASIC16■□□□□ 0.15
XPAP23025 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16■□□□□ 0.15
XPAP23025 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16■□□□□ 0.15
XPAP23025 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
XPAP23025 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16■□□□□ 0.15
XPAP23025 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
XPAP23025 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
XPAP23025 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
XPAP23025 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16■□□□□ 0.15
XPAP23025 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
XPAP23025 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
XPAP23025 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
XPAP23025 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16■□□□□ 0.15
XPAP23025 MIR661-201ENST00000384842 89 ntBASIC16■□□□□ 0.15
XPAP23025 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
XPAP23025 HIST3H2BA-201ENST00000436555 524 ntBASIC16■□□□□ 0.15
XPAP23025 AC114501.2-201ENST00000439631 535 ntBASIC16■□□□□ 0.15
XPAP23025 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16■□□□□ 0.15
XPAP23025 EEF1DP4-201ENST00000446006 880 ntBASIC16■□□□□ 0.15
XPAP23025 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16■□□□□ 0.15
XPAP23025 DOC2GP-202ENST00000514950 1163 ntBASIC16■□□□□ 0.15
XPAP23025 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16■□□□□ 0.15
XPAP23025 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16■□□□□ 0.15
XPAP23025 AC025048.3-201ENST00000590609 569 ntBASIC16■□□□□ 0.15
XPAP23025 AC005702.4-201ENST00000618393 416 ntBASIC16■□□□□ 0.15
XPAP23025 AC004461.2-201ENST00000629517 803 ntBASIC16■□□□□ 0.15
XPAP23025 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms