Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB4P16144 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB4P16144 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ITGB4P16144 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.82■□□□□ 0.76
ITGB4P16144 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB4P16144 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB4P16144 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.82■□□□□ 0.76
ITGB4P16144 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITGB4P16144 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB4P16144 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGB4P16144 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.81■□□□□ 0.76
ITGB4P16144 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.81■□□□□ 0.76
ITGB4P16144 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGB4P16144 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC19.81■□□□□ 0.76
ITGB4P16144 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB4P16144 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB4P16144 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB4P16144 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB4P16144 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB4P16144 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB4P16144 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.81■□□□□ 0.76
ITGB4P16144 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
ITGB4P16144 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ITGB4P16144 AC092364.2-201ENST00000596710 2692 ntBASIC19.81■□□□□ 0.76
ITGB4P16144 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGB4P16144 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB4P16144 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGB4P16144 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.81■□□□□ 0.76
ITGB4P16144 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB4P16144 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGB4P16144 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
ITGB4P16144 AC128714.1-201ENST00000637035 887 ntBASIC19.81■□□□□ 0.76
ITGB4P16144 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGB4P16144 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB4P16144 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ITGB4P16144 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB4P16144 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ITGB4P16144 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
ITGB4P16144 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.8■□□□□ 0.76
ITGB4P16144 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB4P16144 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB4P16144 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.8■□□□□ 0.76
ITGB4P16144 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.8■□□□□ 0.76
ITGB4P16144 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB4P16144 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB4P16144 UFM1-202ENST00000379649 846 ntTSL 4 BASIC19.8■□□□□ 0.76
ITGB4P16144 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.8■□□□□ 0.76
ITGB4P16144 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ITGB4P16144 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ITGB4P16144 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.8■□□□□ 0.76
ITGB4P16144 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.8■□□□□ 0.76
ITGB4P16144 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB4P16144 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB4P16144 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB4P16144 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.8■□□□□ 0.76
ITGB4P16144 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.8■□□□□ 0.76
ITGB4P16144 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.8■□□□□ 0.76
ITGB4P16144 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB4P16144 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGB4P16144 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGB4P16144 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB4P16144 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB4P16144 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB4P16144 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB4P16144 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.79■□□□□ 0.76
ITGB4P16144 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.79■□□□□ 0.76
ITGB4P16144 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.79■□□□□ 0.76
ITGB4P16144 AC134698.3-201ENST00000523880 214 ntBASIC19.79■□□□□ 0.76
ITGB4P16144 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGB4P16144 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGB4P16144 AP000346.4-201ENST00000614827 381 ntBASIC19.79■□□□□ 0.76
ITGB4P16144 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.79■□□□□ 0.76
ITGB4P16144 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.79■□□□□ 0.76
ITGB4P16144 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB4P16144 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGB4P16144 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
ITGB4P16144 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGB4P16144 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.79■□□□□ 0.76
ITGB4P16144 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB4P16144 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB4P16144 AC055811.4-201ENST00000624039 1754 ntBASIC19.79■□□□□ 0.76
ITGB4P16144 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB4P16144 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ITGB4P16144 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
ITGB4P16144 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.79■□□□□ 0.76
ITGB4P16144 PDIA3P2-201ENST00000428073 158 ntBASIC19.79■□□□□ 0.76
ITGB4P16144 CHMP1AP1-201ENST00000445563 662 ntBASIC19.79■□□□□ 0.76
ITGB4P16144 FTLP1-201ENST00000449155 526 ntBASIC19.79■□□□□ 0.76
ITGB4P16144 MARK2P5-201ENST00000507649 634 ntBASIC19.79■□□□□ 0.76
ITGB4P16144 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.79■□□□□ 0.76
ITGB4P16144 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.79■□□□□ 0.76
ITGB4P16144 RN7SL774P-201ENST00000577467 290 ntBASIC19.79■□□□□ 0.76
ITGB4P16144 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.79■□□□□ 0.76
ITGB4P16144 AC079336.7-201ENST00000623428 1078 ntBASIC19.79■□□□□ 0.76
ITGB4P16144 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.79■□□□□ 0.76
ITGB4P16144 CDK7-214ENST00000626796 358 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGB4P16144 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.79■□□□□ 0.76
ITGB4P16144 AL603764.1-201ENST00000636452 321 ntBASIC19.79■□□□□ 0.76
ITGB4P16144 TUBBP5-203ENST00000508529 1334 ntBASIC19.78■□□□□ 0.76
ITGB4P16144 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms