Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.47■□□□□ 0.23
H2AFXP16104 MIR4321-201ENST00000592276 80 ntBASIC16.47■□□□□ 0.23
H2AFXP16104 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.47■□□□□ 0.23
H2AFXP16104 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
H2AFXP16104 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
H2AFXP16104 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
H2AFXP16104 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
H2AFXP16104 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.47■□□□□ 0.23
H2AFXP16104 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.47■□□□□ 0.23
H2AFXP16104 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.47■□□□□ 0.23
H2AFXP16104 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC16.47■□□□□ 0.23
H2AFXP16104 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.47■□□□□ 0.23
H2AFXP16104 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
H2AFXP16104 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.47■□□□□ 0.23
H2AFXP16104 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2AFXP16104 OR2I1P-210ENST00000642037 4691 ntBASIC16.46■□□□□ 0.23
H2AFXP16104 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2AFXP16104 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2AFXP16104 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2AFXP16104 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
H2AFXP16104 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
H2AFXP16104 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H2AFXP16104 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC16.46■□□□□ 0.23
H2AFXP16104 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2AFXP16104 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2AFXP16104 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2AFXP16104 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
H2AFXP16104 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2AFXP16104 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
H2AFXP16104 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
H2AFXP16104 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.46■□□□□ 0.23
H2AFXP16104 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
H2AFXP16104 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H2AFXP16104 CD99P1-205ENST00000527459 561 ntBASIC16.46■□□□□ 0.23
H2AFXP16104 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.46■□□□□ 0.23
H2AFXP16104 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.46■□□□□ 0.23
H2AFXP16104 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.46■□□□□ 0.23
H2AFXP16104 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.46■□□□□ 0.23
H2AFXP16104 AC139887.4-201ENST00000607877 719 ntBASIC16.46■□□□□ 0.23
H2AFXP16104 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2AFXP16104 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.46■□□□□ 0.23
H2AFXP16104 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
H2AFXP16104 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
H2AFXP16104 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.46■□□□□ 0.23
H2AFXP16104 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2AFXP16104 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.46■□□□□ 0.23
H2AFXP16104 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2AFXP16104 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.46■□□□□ 0.23
H2AFXP16104 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2AFXP16104 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
H2AFXP16104 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.45■□□□□ 0.22
H2AFXP16104 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
H2AFXP16104 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.45■□□□□ 0.22
H2AFXP16104 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.45■□□□□ 0.22
H2AFXP16104 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.45■□□□□ 0.22
H2AFXP16104 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
H2AFXP16104 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC16.45■□□□□ 0.22
H2AFXP16104 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.45■□□□□ 0.22
H2AFXP16104 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.45■□□□□ 0.22
H2AFXP16104 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.45■□□□□ 0.22
H2AFXP16104 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.45■□□□□ 0.22
H2AFXP16104 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
H2AFXP16104 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
H2AFXP16104 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.45■□□□□ 0.22
H2AFXP16104 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.45■□□□□ 0.22
H2AFXP16104 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
H2AFXP16104 KRT17P2-201ENST00000300992 1314 ntBASIC16.45■□□□□ 0.22
H2AFXP16104 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2AFXP16104 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.44■□□□□ 0.22
H2AFXP16104 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
H2AFXP16104 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
H2AFXP16104 AC130686.1-201ENST00000622936 2466 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms