Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ITGA4P13612 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ITGA4P13612 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.41■□□□□ 0.38
ITGA4P13612 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
ITGA4P13612 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
ITGA4P13612 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ITGA4P13612 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.41■□□□□ 0.38
ITGA4P13612 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ITGA4P13612 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ITGA4P13612 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ITGA4P13612 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ITGA4P13612 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ITGA4P13612 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.4■□□□□ 0.38
ITGA4P13612 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ITGA4P13612 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.4■□□□□ 0.38
ITGA4P13612 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.4■□□□□ 0.38
ITGA4P13612 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.4■□□□□ 0.38
ITGA4P13612 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.4■□□□□ 0.38
ITGA4P13612 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.4■□□□□ 0.38
ITGA4P13612 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
ITGA4P13612 COX5BP8-201ENST00000416911 349 ntBASIC17.4■□□□□ 0.38
ITGA4P13612 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.4■□□□□ 0.38
ITGA4P13612 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.4■□□□□ 0.38
ITGA4P13612 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.4■□□□□ 0.38
ITGA4P13612 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
ITGA4P13612 CHCHD2P3-201ENST00000603038 451 ntBASIC17.4■□□□□ 0.38
ITGA4P13612 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.4■□□□□ 0.38
ITGA4P13612 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.4■□□□□ 0.38
ITGA4P13612 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.4■□□□□ 0.38
ITGA4P13612 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ITGA4P13612 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.4■□□□□ 0.38
ITGA4P13612 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ITGA4P13612 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.4■□□□□ 0.38
ITGA4P13612 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.4■□□□□ 0.38
ITGA4P13612 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
ITGA4P13612 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ITGA4P13612 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ITGA4P13612 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
ITGA4P13612 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
ITGA4P13612 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.39■□□□□ 0.38
ITGA4P13612 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
ITGA4P13612 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ITGA4P13612 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.39■□□□□ 0.37
ITGA4P13612 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
ITGA4P13612 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ITGA4P13612 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
ITGA4P13612 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.39■□□□□ 0.37
ITGA4P13612 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ITGA4P13612 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.39■□□□□ 0.37
ITGA4P13612 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.39■□□□□ 0.37
ITGA4P13612 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.39■□□□□ 0.37
ITGA4P13612 AL589987.1-201ENST00000453380 819 ntBASIC17.39■□□□□ 0.37
ITGA4P13612 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.39■□□□□ 0.37
ITGA4P13612 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.39■□□□□ 0.37
ITGA4P13612 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.39■□□□□ 0.37
ITGA4P13612 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.39■□□□□ 0.37
ITGA4P13612 TIMM17BP1-201ENST00000545713 516 ntBASIC17.39■□□□□ 0.37
ITGA4P13612 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
ITGA4P13612 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.39■□□□□ 0.37
ITGA4P13612 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.39■□□□□ 0.37
ITGA4P13612 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.39■□□□□ 0.37
ITGA4P13612 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ITGA4P13612 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ITGA4P13612 AC104640.1-201ENST00000562617 2109 ntBASIC17.39■□□□□ 0.37
ITGA4P13612 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.39■□□□□ 0.37
ITGA4P13612 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.39■□□□□ 0.37
ITGA4P13612 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 SLC7A15P-201ENST00000424028 1363 ntBASIC17.39■□□□□ 0.37
ITGA4P13612 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
ITGA4P13612 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ITGA4P13612 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ITGA4P13612 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms