Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.63■□□□□ 0.57
TOP1P11387 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
TOP1P11387 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.63■□□□□ 0.57
TOP1P11387 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
TOP1P11387 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.63■□□□□ 0.57
TOP1P11387 AC011477.6-201ENST00000604980 1927 ntBASIC18.63■□□□□ 0.57
TOP1P11387 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TOP1P11387 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.63■□□□□ 0.57
TOP1P11387 DOC2GP-202ENST00000514950 1163 ntBASIC18.63■□□□□ 0.57
TOP1P11387 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.63■□□□□ 0.57
TOP1P11387 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.63■□□□□ 0.57
TOP1P11387 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.63■□□□□ 0.57
TOP1P11387 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.63■□□□□ 0.57
TOP1P11387 AC092337.1-201ENST00000568699 1129 ntBASIC18.63■□□□□ 0.57
TOP1P11387 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.63■□□□□ 0.57
TOP1P11387 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TOP1P11387 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 AL450472.2-201ENST00000603663 1156 ntBASIC18.63■□□□□ 0.57
TOP1P11387 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.63■□□□□ 0.57
TOP1P11387 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
TOP1P11387 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TOP1P11387 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.63■□□□□ 0.57
TOP1P11387 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
TOP1P11387 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TOP1P11387 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TOP1P11387 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TOP1P11387 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TOP1P11387 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TOP1P11387 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TOP1P11387 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
TOP1P11387 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TOP1P11387 SPDYE19P-201ENST00000338590 713 ntBASIC18.62■□□□□ 0.57
TOP1P11387 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TOP1P11387 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.62■□□□□ 0.57
TOP1P11387 TARDBPP1-201ENST00000442013 1203 ntBASIC18.62■□□□□ 0.57
TOP1P11387 CRB3P1-201ENST00000449338 276 ntBASIC18.62■□□□□ 0.57
TOP1P11387 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.62■□□□□ 0.57
TOP1P11387 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TOP1P11387 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.62■□□□□ 0.57
TOP1P11387 AC190387.1-201ENST00000551683 408 ntBASIC18.62■□□□□ 0.57
TOP1P11387 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.62■□□□□ 0.57
TOP1P11387 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.62■□□□□ 0.57
TOP1P11387 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.62■□□□□ 0.57
TOP1P11387 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TOP1P11387 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TOP1P11387 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.62■□□□□ 0.57
TOP1P11387 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.62■□□□□ 0.57
TOP1P11387 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.62■□□□□ 0.57
TOP1P11387 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TOP1P11387 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.62■□□□□ 0.57
TOP1P11387 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.62■□□□□ 0.57
TOP1P11387 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.62■□□□□ 0.57
TOP1P11387 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.62■□□□□ 0.57
TOP1P11387 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.62■□□□□ 0.57
TOP1P11387 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TOP1P11387 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TOP1P11387 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.62■□□□□ 0.57
TOP1P11387 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TOP1P11387 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP1P11387 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.61■□□□□ 0.57
TOP1P11387 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.61■□□□□ 0.57
TOP1P11387 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TOP1P11387 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.61■□□□□ 0.57
TOP1P11387 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.61■□□□□ 0.57
TOP1P11387 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.61■□□□□ 0.57
TOP1P11387 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TOP1P11387 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.61■□□□□ 0.57
TOP1P11387 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP1P11387 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.61■□□□□ 0.57
TOP1P11387 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TOP1P11387 AC069224.1-201ENST00000566372 1715 ntBASIC18.61■□□□□ 0.57
TOP1P11387 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP1P11387 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP1P11387 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP1P11387 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TOP1P11387 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TOP1P11387 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TOP1P11387 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.61■□□□□ 0.57
TOP1P11387 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.61■□□□□ 0.57
TOP1P11387 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.61■□□□□ 0.57
TOP1P11387 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.61■□□□□ 0.57
TOP1P11387 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.61■□□□□ 0.57
TOP1P11387 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.61■□□□□ 0.57
TOP1P11387 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.61■□□□□ 0.57
TOP1P11387 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.61■□□□□ 0.57
TOP1P11387 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.61■□□□□ 0.57
TOP1P11387 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms