Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL1P09341 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CXCL1P09341 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL1P09341 NUTM2HP-201ENST00000442076 2498 ntBASIC12.36□□□□□ -0.43
CXCL1P09341 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL1P09341 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.36□□□□□ -0.43
CXCL1P09341 AC126365.1-201ENST00000578585 1514 ntBASIC12.36□□□□□ -0.43
CXCL1P09341 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CXCL1P09341 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CXCL1P09341 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL1P09341 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CXCL1P09341 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.36□□□□□ -0.43
CXCL1P09341 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CXCL1P09341 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CXCL1P09341 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.35□□□□□ -0.43
CXCL1P09341 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 SPDYE21P-201ENST00000413323 827 ntBASIC12.35□□□□□ -0.43
CXCL1P09341 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.35□□□□□ -0.43
CXCL1P09341 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.35□□□□□ -0.43
CXCL1P09341 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.35□□□□□ -0.43
CXCL1P09341 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 TERC-201ENST00000602385 541 ntBASIC12.35□□□□□ -0.43
CXCL1P09341 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CXCL1P09341 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
CXCL1P09341 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.35□□□□□ -0.43
CXCL1P09341 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CXCL1P09341 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CXCL1P09341 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CXCL1P09341 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL1P09341 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.34□□□□□ -0.43
CXCL1P09341 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL1P09341 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.34□□□□□ -0.43
CXCL1P09341 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.34□□□□□ -0.43
CXCL1P09341 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL1P09341 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL1P09341 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL1P09341 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL1P09341 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL1P09341 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL1P09341 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.34□□□□□ -0.43
CXCL1P09341 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL1P09341 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CXCL1P09341 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CXCL1P09341 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms