Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 U1.21-201ENST00000580816 167 ntBASIC15.81■□□□□ 0.12
CAPNS1P04632 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPNS1P04632 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CAPNS1P04632 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPNS1P04632 AL109936.8-201ENST00000641772 604 ntBASIC15.81■□□□□ 0.12
CAPNS1P04632 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CAPNS1P04632 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CAPNS1P04632 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CAPNS1P04632 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.81■□□□□ 0.12
CAPNS1P04632 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CAPNS1P04632 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CAPNS1P04632 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.81■□□□□ 0.12
CAPNS1P04632 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CAPNS1P04632 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPNS1P04632 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CAPNS1P04632 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPNS1P04632 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPNS1P04632 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPNS1P04632 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPNS1P04632 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.8■□□□□ 0.12
CAPNS1P04632 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPNS1P04632 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 MIR1908-201ENST00000410394 80 ntBASIC15.8■□□□□ 0.12
CAPNS1P04632 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.8■□□□□ 0.12
CAPNS1P04632 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 TTTY23B-201ENST00000442790 549 ntBASIC15.8■□□□□ 0.12
CAPNS1P04632 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPNS1P04632 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CAPNS1P04632 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.8■□□□□ 0.12
CAPNS1P04632 AC073389.1-201ENST00000595595 795 ntBASIC15.8■□□□□ 0.12
CAPNS1P04632 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPNS1P04632 AC006449.6-201ENST00000612330 2296 ntBASIC15.8■□□□□ 0.12
CAPNS1P04632 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPNS1P04632 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.8■□□□□ 0.12
CAPNS1P04632 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.8■□□□□ 0.12
CAPNS1P04632 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CAPNS1P04632 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 AC016027.1-202ENST00000607927 1699 ntBASIC15.79■□□□□ 0.12
CAPNS1P04632 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CAPNS1P04632 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CAPNS1P04632 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPNS1P04632 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CAPNS1P04632 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CAPNS1P04632 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPNS1P04632 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPNS1P04632 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CAPNS1P04632 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPNS1P04632 ELK2AP-201ENST00000392510 1007 ntBASIC15.79■□□□□ 0.12
CAPNS1P04632 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CAPNS1P04632 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPNS1P04632 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CAPNS1P04632 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.79■□□□□ 0.12
CAPNS1P04632 AC093004.1-201ENST00000508850 424 ntBASIC15.79■□□□□ 0.12
CAPNS1P04632 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPNS1P04632 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.79■□□□□ 0.12
CAPNS1P04632 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 AC133552.6-201ENST00000613406 534 ntBASIC15.79■□□□□ 0.12
CAPNS1P04632 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPNS1P04632 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPNS1P04632 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPNS1P04632 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPNS1P04632 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPNS1P04632 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPNS1P04632 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPNS1P04632 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPNS1P04632 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CAPNS1P04632 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPNS1P04632 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPNS1P04632 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPNS1P04632 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms