Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.05■□□□□ 0.32
TUBB4AP04350 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 AC016734.2-201ENST00000624325 1377 ntBASIC17.04■□□□□ 0.32
TUBB4AP04350 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TUBB4AP04350 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.04■□□□□ 0.32
TUBB4AP04350 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.04■□□□□ 0.32
TUBB4AP04350 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 RNU1-129P-201ENST00000384064 167 ntBASIC17.04■□□□□ 0.32
TUBB4AP04350 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 U1.21-201ENST00000580816 167 ntBASIC17.04■□□□□ 0.32
TUBB4AP04350 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.04■□□□□ 0.32
TUBB4AP04350 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.04■□□□□ 0.32
TUBB4AP04350 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.04■□□□□ 0.32
TUBB4AP04350 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 AC067750.1-201ENST00000608826 6545 ntBASIC17.04■□□□□ 0.32
TUBB4AP04350 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.04■□□□□ 0.32
TUBB4AP04350 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.04■□□□□ 0.32
TUBB4AP04350 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TUBB4AP04350 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TUBB4AP04350 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.03■□□□□ 0.32
TUBB4AP04350 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 AC005332.1-201ENST00000577698 1310 ntBASIC17.03■□□□□ 0.32
TUBB4AP04350 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
TUBB4AP04350 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 AC027601.5-201ENST00000624065 2482 ntBASIC17.03■□□□□ 0.32
TUBB4AP04350 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.03■□□□□ 0.32
TUBB4AP04350 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.03■□□□□ 0.32
TUBB4AP04350 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TUBB4AP04350 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.03■□□□□ 0.32
TUBB4AP04350 GPX1P2-201ENST00000429271 606 ntBASIC17.03■□□□□ 0.32
TUBB4AP04350 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.03■□□□□ 0.32
TUBB4AP04350 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.03■□□□□ 0.32
TUBB4AP04350 TPSP2-201ENST00000561760 610 ntBASIC17.03■□□□□ 0.32
TUBB4AP04350 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.03■□□□□ 0.32
TUBB4AP04350 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TUBB4AP04350 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TUBB4AP04350 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.03■□□□□ 0.32
TUBB4AP04350 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.03■□□□□ 0.32
TUBB4AP04350 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TUBB4AP04350 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.03■□□□□ 0.32
TUBB4AP04350 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TUBB4AP04350 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TUBB4AP04350 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.03■□□□□ 0.32
TUBB4AP04350 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TUBB4AP04350 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.02■□□□□ 0.32
TUBB4AP04350 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.02■□□□□ 0.32
TUBB4AP04350 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.02■□□□□ 0.32
TUBB4AP04350 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.02■□□□□ 0.32
TUBB4AP04350 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TUBB4AP04350 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TUBB4AP04350 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.02■□□□□ 0.32
TUBB4AP04350 RPL5P21-201ENST00000404620 815 ntBASIC17.02■□□□□ 0.32
TUBB4AP04350 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms