Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.9□□□□□ -0.02
PDGFAP04085 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PDGFAP04085 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 AC092384.3-202ENST00000564646 2873 ntBASIC14.9□□□□□ -0.02
PDGFAP04085 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.9□□□□□ -0.02
PDGFAP04085 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PDGFAP04085 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.9□□□□□ -0.02
PDGFAP04085 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.9□□□□□ -0.02
PDGFAP04085 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.9□□□□□ -0.02
PDGFAP04085 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.9□□□□□ -0.02
PDGFAP04085 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.9□□□□□ -0.02
PDGFAP04085 AC092658.1-201ENST00000505836 891 ntBASIC14.9□□□□□ -0.02
PDGFAP04085 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.9□□□□□ -0.02
PDGFAP04085 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.9□□□□□ -0.02
PDGFAP04085 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.9□□□□□ -0.02
PDGFAP04085 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.9□□□□□ -0.02
PDGFAP04085 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PDGFAP04085 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.9□□□□□ -0.02
PDGFAP04085 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.9□□□□□ -0.02
PDGFAP04085 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.9□□□□□ -0.02
PDGFAP04085 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.9□□□□□ -0.02
PDGFAP04085 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PDGFAP04085 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.9□□□□□ -0.02
PDGFAP04085 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.9□□□□□ -0.02
PDGFAP04085 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.9□□□□□ -0.02
PDGFAP04085 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PDGFAP04085 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.9□□□□□ -0.02
PDGFAP04085 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.9□□□□□ -0.02
PDGFAP04085 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
PDGFAP04085 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 AL512652.2-201ENST00000625156 1716 ntBASIC14.89□□□□□ -0.03
PDGFAP04085 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PDGFAP04085 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
PDGFAP04085 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
PDGFAP04085 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PDGFAP04085 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.89□□□□□ -0.03
PDGFAP04085 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.89□□□□□ -0.03
PDGFAP04085 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PDGFAP04085 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 AC024267.1-201ENST00000582320 895 ntBASIC14.89□□□□□ -0.03
PDGFAP04085 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PDGFAP04085 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.89□□□□□ -0.03
PDGFAP04085 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 AC099568.2-201ENST00000609194 695 ntBASIC14.89□□□□□ -0.03
PDGFAP04085 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 WFDC1-204ENST00000613603 549 ntBASIC14.89□□□□□ -0.03
PDGFAP04085 MIR6775-201ENST00000617557 69 ntBASIC14.89□□□□□ -0.03
PDGFAP04085 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 NFIC-211ENST00000641145 8399 ntBASIC14.89□□□□□ -0.03
PDGFAP04085 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PDGFAP04085 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PDGFAP04085 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.89□□□□□ -0.03
PDGFAP04085 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.89□□□□□ -0.03
PDGFAP04085 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PDGFAP04085 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.89□□□□□ -0.03
PDGFAP04085 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PDGFAP04085 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.88□□□□□ -0.03
PDGFAP04085 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFAP04085 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PDGFAP04085 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.88□□□□□ -0.03
PDGFAP04085 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.88□□□□□ -0.03
PDGFAP04085 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms