Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.35□□□□□ -0.27
ABCA1O95477 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.35□□□□□ -0.27
ABCA1O95477 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.35□□□□□ -0.27
ABCA1O95477 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.35□□□□□ -0.27
ABCA1O95477 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.35□□□□□ -0.27
ABCA1O95477 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.35□□□□□ -0.27
ABCA1O95477 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.35□□□□□ -0.27
ABCA1O95477 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.35□□□□□ -0.27
ABCA1O95477 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ABCA1O95477 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
ABCA1O95477 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
ABCA1O95477 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.35□□□□□ -0.27
ABCA1O95477 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ABCA1O95477 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ABCA1O95477 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ABCA1O95477 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.34□□□□□ -0.27
ABCA1O95477 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ABCA1O95477 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.34□□□□□ -0.27
ABCA1O95477 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.34□□□□□ -0.27
ABCA1O95477 AC024267.1-201ENST00000582320 895 ntBASIC13.34□□□□□ -0.27
ABCA1O95477 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.34□□□□□ -0.27
ABCA1O95477 BTNL10-201ENST00000595971 695 ntBASIC13.34□□□□□ -0.27
ABCA1O95477 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.34□□□□□ -0.27
ABCA1O95477 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.34□□□□□ -0.27
ABCA1O95477 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
ABCA1O95477 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.34□□□□□ -0.27
ABCA1O95477 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.34□□□□□ -0.27
ABCA1O95477 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ABCA1O95477 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.34□□□□□ -0.27
ABCA1O95477 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ABCA1O95477 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.34□□□□□ -0.27
ABCA1O95477 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.34□□□□□ -0.27
ABCA1O95477 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ABCA1O95477 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.34□□□□□ -0.27
ABCA1O95477 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.34□□□□□ -0.27
ABCA1O95477 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
ABCA1O95477 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.34□□□□□ -0.27
ABCA1O95477 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.34□□□□□ -0.27
ABCA1O95477 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
ABCA1O95477 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ABCA1O95477 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
ABCA1O95477 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ABCA1O95477 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ABCA1O95477 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.34□□□□□ -0.27
ABCA1O95477 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
ABCA1O95477 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ABCA1O95477 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.34□□□□□ -0.27
ABCA1O95477 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ABCA1O95477 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ABCA1O95477 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ABCA1O95477 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
ABCA1O95477 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.33□□□□□ -0.28
ABCA1O95477 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCA1O95477 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.33□□□□□ -0.28
ABCA1O95477 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.33□□□□□ -0.28
ABCA1O95477 SPDYE17-201ENST00000412399 783 ntBASIC13.33□□□□□ -0.28
ABCA1O95477 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.33□□□□□ -0.28
ABCA1O95477 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ABCA1O95477 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.33□□□□□ -0.28
ABCA1O95477 RARRES2P5-201ENST00000564013 466 ntBASIC13.33□□□□□ -0.28
ABCA1O95477 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.33□□□□□ -0.28
ABCA1O95477 MIR6869-201ENST00000619434 62 ntBASIC13.33□□□□□ -0.28
ABCA1O95477 RPSAP52-203ENST00000622976 1023 ntBASIC13.33□□□□□ -0.28
ABCA1O95477 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ABCA1O95477 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.33□□□□□ -0.28
ABCA1O95477 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ABCA1O95477 CLK3P2-201ENST00000427566 1453 ntBASIC13.33□□□□□ -0.28
ABCA1O95477 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCA1O95477 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ABCA1O95477 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCA1O95477 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.33□□□□□ -0.28
ABCA1O95477 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ABCA1O95477 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.33□□□□□ -0.28
ABCA1O95477 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms